Coregonus clupeaformis (lake whitefish): 121563282
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Entry
121563282 CDS
T08357
Name
(RefSeq) sodium channel subunit beta-1 isoform X1
KO
K04845
voltage-gated sodium channel type I beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
121563282
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121563282
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121563282
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121563282
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
ig
Ig_3
VEGFR1-3_N_Ig-like
Ig_CD22
ADNP_N
Ig_2
Motif
Other DBs
NCBI-GeneID:
121563282
NCBI-ProteinID:
XP_041731179
LinkDB
All DBs
Position
Unknown
AA seq
221 aa
AA seq
DB search
MSAVQLLLVPLALWALQASLCHGACVEVDSDTDAVVNEGFKLGCISCKMRGEVPAEATVE
WSFMPQGESEFTKIYSYEDLRSDIPDERFYARLYWNGSKKTKDLQDGSIYILNVTWNDTG
TYRCSFNRILTFRSYEFQTNATKIVHLNVVPRLTRGLASILSEVMMYVTIIGLQVWLVVE
MIYCYRKISAQGEEALRESAEEYLAIASESKENCAMVAVAE
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagttcagctgctgctggtcccgctggcactgtgggctttgcaagcgtctttg
tgccatggagcgtgtgtggaggtggactctgacactgacgcggtggtcaacgaaggcttt
aagctgggttgtatctcctgtaaaatgaggggcgaggtgcccgccgaggccactgttgaa
tggtccttcatgccccaaggggagagcgagttcacaaaaatctacagctacgaggatcta
aggagcgacatcccggacgagcgcttctacgcgcgtctgtactggaatggcagcaagaag
accaaggacctgcaggacggctccatctacatcctgaacgtgacgtggaacgacacgggc
acctaccgctgctccttcaaccgcatcctcaccttccgctcctacgagttccaaaccaac
gccaccaagatcgtccacctcaacgtggtgccaagattgaccagggggttagcgtccatc
ttgtctgaggtgatgatgtatgtcaccatcattgggctgcaggtatggctggtggtggag
atgatttactgctacaggaagatatcagcacaaggcgaggaagcattgagagagagcgcg
gaggagtacttagctatagcttcggagagtaaagagaactgtgcaatggtggcagtggca
gaatag
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