Coregonus clupeaformis (lake whitefish): 121563453
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Entry
121563453 CDS
T08357
Name
(RefSeq) retinoic acid receptor beta isoform X1
KO
K08528
retinoic acid receptor beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121563453
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121563453
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121563453
Nuclear receptors [BR:
cclu03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
121563453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121563453
NCBI-ProteinID:
XP_041731298
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MFDYMDFLAVCPGEMLDFYTASPCMLQEPSLTACFTGLTETDWQVHRIAQSAVETQSSSS
EDLFASPLSPPPPPRTYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSVQKNMVYTCHRDK
NCIINKITRNRCQYCRLQRCFAAGMSKESVRNDRSKRKEKKETPKMTIMETYELTAELGC
VVENICRAHRETFPSLCQLGKYTTNSSSDTRIQLDLGLWDKFSELATKCIIKVVEFAKRV
PGFTGLTITDQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLTRTQIHNAGFGPLT
DQVFTFAGQLLPLEMDDTESGLLSAICLVSGDRQDLEEPSKVEVLQEPLLEALKIYSRKR
RPSMPLMFPKVLMKITDLRSISAKGAERVVTLKMEIPGSMPPLIQEMLEEMENLEKQKQS
EEEQRADKNITHTMSTQ
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactatatggattttctcgcagtctgtccaggagaaatgctggatttctatact
gcaagtccttgtatgctccaggaaccatctctaaccgcatgcttcactggactaacagaa
acggattggcaagttcatcggatcgcgcaatcagctgtggaaacccagagctccagctca
gaggacctgttcgccagtcctctctcacctccgccccctccccgcacctacaaaccctgc
tttgtgtgccaagacaagtcctcaggctaccactatggcgtcagtgcttgtgagggctgt
aagggtttcttccgtagaagtgtccagaagaacatggtttacacgtgccaccgggacaag
aactgcatcatcaataagatcaccaggaaccgctgtcagtactgccggctacagaggtgc
ttcgccgcgggcatgtccaaggagtctgtcaggaatgaccggagcaagaggaaggagaag
aaggagactcccaagatgaccatcatggagacatatgagctgacagcagaactgggctgt
gtagtggagaacatctgtagggctcatagagagaccttcccttccctctgccagctgggc
aaatacactacaaactcaagctcagacactaggatccagttggacctggggctgtgggat
aagttcagtgagctggccaccaaatgtatcatcaaggttgtggagtttgccaaacgggtg
cctggcttcaccggcctgaccataactgaccagatcaccctcctcaaagcagcctgtctg
gacattctgattctgcggatctgtacgaggtacacacctgaccaggacactatgaccttc
tcagacgggctgaccctgacccgtacacagatccacaacgctggctttggcccactcaca
gaccaggtgttcaccttcgccggccagctgctgcccttggagatggatgacacagaaagt
ggcctcctcagtgccatctgcctggtgtctggagatcggcaggatctggaggagccgtct
aaggtggaagtcctgcaggagcccttactggaggccttgaagatctactcccgtaaacgc
cggcctagcatgcccctcatgttccctaaggtcctcatgaagatcaccgacctgcgcagc
atcagcgccaaaggagctgaacgtgtggtgacgttgaagatggagatcccaggttccatg
cctcctctgatccaggagatgctggaggagatggagaacctggagaagcagaagcagtct
gaggaggagcagagagcagacaagaacatcacccacaccatgtccacacagtaa
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