Coregonus clupeaformis (lake whitefish): 121563499
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Entry
121563499 CDS
T08357
Name
(RefSeq) immunoglobulin superfamily member 11-like isoform X1
KO
K06791
immunoglobulin superfamily, member 11
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121563499
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121563499
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
CTX family
121563499
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
V-set
Ig_2
ig
I-set
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
C2-set_3
Ig_PDGFR_d4
DUF2448
Sp38
Motif
Other DBs
NCBI-GeneID:
121563499
NCBI-ProteinID:
XP_041731345
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All DBs
Position
5
Genome browser
AA seq
471 aa
AA seq
DB search
MMKFHNSDLWIAWLVLFCMEGSRFDLHTGTVSVRALDVTVTQSSIQVARGQAAILPCSFS
TSAALNNLNIIWMVIPLSNANQPEQVIIYQGGQVFSLANHLNGRVGFVATMPSTSASIFI
NNTQLSDTGTYQCLVNNLPDRGGRNIGVIGLTVLVPPSVPACRIQGTLDVGADIMLMCSS
EEGIPTPTYAWEKLESLPKLPHTAMQDQMQGTVTLRNISTSTSGLYQCTASNAIGKSTCL
LNLQVVAPQPQSVGLIAGTIATGVLAVIICSLLVLVTLFYWKNKNKYEEEEIPNEIREDD
LPPKRSSSVKAFHADASSSENDTLTSTNTYNSRYWHNPKPNYDTNSYTRYNGDTRQTFST
GQAGHTGQKGVHAAHTGHGTLAPPGSAPLARQAYSNGSHTLPPPKTLVVTTNSAPSPPTM
VRSNGSVSLKPVTVASHGGYTHSYAVSQATLERMGAVPVLAPAQSRAGSLV
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaattccataattcggacctatggattgcttggctggttttattttgcatggaa
ggttcaagatttgatctacacacaggaacagtgagcgtgagggcgttggatgtcacagtg
acccagagcagcatccaggtagcccgcggccaggcggccatcttgccctgctctttctcc
accagtgctgccctcaacaacctcaacattatctggatggtcatcccgctgtccaatgcc
aaccagcccgaacaggtgatcatctaccaaggtggccaagtgttcagtctagccaaccac
ttaaatggccgggtgggtttcgtggccaccatgcccagcacaagtgcttctatcttcatc
aacaacacccagctgtcagacacggggacctaccagtgcctggtcaacaacctccccgac
agaggggggcgcaacatcggggtcatcggcctcaccgtgctggtgcccccctcggtgccc
gcatgccgtatccagggaacgctggacgtgggcgctgacatcatgctgatgtgcagcagc
gaggaggggatccccacgcccacctacgcctgggagaagttggagtcgctgcccaagctg
ccccacaccgccatgcaagaccagatgcaagggaccgtaacactgaggaacatcagcacc
agtacatctggtctgtaccagtgtacagcctccaacgccatcggcaagagcacctgtcta
ctcaacctgcaggttgtggcaccccagccccagagtgtgggtctcatagctggcaccatc
gccacgggcgtgctggctgtcatcatctgctctctactggtgctggttacactcttctac
tggaagaacaagaacaaatacgaggaggaggagatacccaacgagatcagggaggacgac
ctgccccctaagaggtcgtcgtcagtgaaagcgtttcacgccgacgcctcatcctcagag
aacgacaccctgacgtccaccaacacctacaacagccgctactggcacaaccccaagccc
aactacgacaccaactcctacacccgctacaacggcgacacgcgccagacgttctctacg
gggcaggcaggacacacaggtcaaaagggggtacatgcagctcacacaggacacgggacg
ctggcgccgccgggctccgccccactggcccgccaggcctactccaatggtagccacacc
ctccccccgcccaagactctggtagtcactaccaactccgccccctccccgcccaccatg
gtgcgcagcaatggctcggtgagcctgaagcctgtgacggtggcatcgcacggcgggtac
acgcactcgtacgccgtaagccaggccacgctggagcgcatgggcgccgtgcccgtcttg
gcaccagcccagagcagagcaggctctctggtctaa
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