Coregonus clupeaformis (lake whitefish): 121563747
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Entry
121563747 CDS
T08357
Name
(RefSeq) retinoic acid receptor beta-like
KO
K08528
retinoic acid receptor beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121563747
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121563747
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121563747
Nuclear receptors [BR:
cclu03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
121563747
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121563747
NCBI-ProteinID:
XP_041731404
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Position
28:20343439..20358381
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AA seq
438 aa
AA seq
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MFDCMDFLAVCPGEMLDFYTASPCMLQEPSLTACFTGLTETDWQIHRIAQSVETQSSSSE
DLFASPLSPPPPPRTYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSVQKNMVYTCHRDKN
CIINKITRNRCQCCRLQRCFAAGMSKESVRNDRSKRKEKKETPKMTIIETYELTAELGCV
VENICRAHRETFPSLCQLGKYTTNSSSDTRIQLDLGLWDKFSELATKCIIKVVEFAKRVP
GFTGLTITDQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLTRTQIHNAGFGPLTD
QVFTFAGQLLPLEMDDTESGLLSAICLVSGDRQDLEEPSKVEVLQEPLLEALKIYSRKRR
PSMPLMFPKVLMKITDLRSISAKGAERVVTLKMEIPGSMPPLIQEMLEEMENLEKQKQSE
EEQRADKNITPTHTMSAQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtatggattttctcgcagtctgtccaggagaaatgctggatttctatacg
gcaagtccttgtatgctccaggaaccatctctaactgcatgcttcactggactaacagaa
accgattggcaaattcatcggatcgcgcaatctgtggaaacccagagctccagctcagag
gacctgttcgccagtcctctctcacctccgccccctcctcgcacctacaaaccctgcttt
gtgtgccaagacaagtcctcaggctaccactatggcgtcagtgcttgtgagggctgtaag
ggtttcttccgtagaagtgtccagaagaacatggtttacacgtgccaccgggacaagaac
tgcatcatcaataagatcaccaggaaccgctgtcagtgctgccggctacagaggtgcttc
gccgcgggcatgtccaaggagtctgtcaggaatgacaggagcaagaggaaggagaagaag
gagactcccaagatgaccatcatcgagacatatgagctgacagcagaactgggctgtgta
gtggagaacatctgtagggctcatagagagaccttcccttccctctgccagctgggcaaa
tacactacaaactcaagctcagacactaggatccagttggacctggggctgtgggataag
ttcagtgagctggccaccaaatgtatcatcaaggttgtggagtttgccaaacgggtgcct
ggcttcaccggcctgaccataactgaccagatcaccctcctcaaagcagcctgtctggac
attctgattctgcggatctgtacgaggtacacacctgaccaggacactatgaccttctca
gacgggctgaccctgacccgtacacagatccacaacgctggctttggcccgctcacagac
caggtgttcaccttcgccggccagctgctgcccttggagatggatgacacagaaagcggc
ctcctcagcgccatctgcttggtgtctggagatcggcaggatctggaggagccgtctaag
gtggaggtcctgcaggagcccttactggaggccttgaagatctactcccgtaaacgccgg
cccagcatgcccctcatgttccctaaggtcctcatgaagatcaccgacctgcgcagcatc
agcgccaaaggagctgagcgtgtggtgacgttgaagatggagatcccaggttccatgcct
cctctgatccaggagatgctggaggagatggagaacctggagaagcagaagcagtctgag
gaggagcagagagcagacaagaacatcacgcccacacacaccatgtctgcacagtaa
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