Coregonus clupeaformis (lake whitefish): 121563794
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Entry
121563794 CDS
T08357
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121563794
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121563794
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121563794
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121563794
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121563794
Membrane trafficking [BR:
cclu04131
]
Autophagy
Other autophagy associated proteins
Others
121563794
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
121563794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
GBP
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
121563794
NCBI-ProteinID:
XP_041731440
LinkDB
All DBs
Position
5:17902726..17921456
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AA seq
679 aa
AA seq
DB search
MRCIVVVGSGGSFCYRQSRDCLITMSEVLMKEMEEVSLCHIKTEEHPENGRSFLLVDEQE
NLQVHDEAQFLEWLSCGDMQGVKVLSIFGNTGDGKSHTLNHILFGGDTVFYTSKSPSSCT
VGVWAAFDPGLGLVALDTEGLLGSAANQNQHMRLLLKVLAVSDVVVYRTRAERLHNDMFQ
FLSSASGAYLKHFTPELRALSSRCGMDVPLSSLGPAIIVFQETTHTQLLGYERTDVPGYA
DTQLQRRFHDLGLGTEAFSSVQYVGTQTITPPTNYSLLLEAVRQQVRNTATRSPRQPAIV
FSALQALSDRFCGEILDDKIPLYSFFPDEYFTCSSVCLSCNIRCKNGMNHLRDRVPHLAD
GLCQYAHQYNNKVLICKRCYEGGREVIVIPKTSASSDNPWFGLAKYAWSGYVLECGSCGI
IYRSRQYWLGNQNPECGVVRPEVKHVWEGSEAFLTDHQNAAQRVLDGMNFVIQSVSEYST
GPTKAVTSWLTDQVAPHYWRPNTDITACHCCKKPFEEAERKHHCRSCGEGFCQACSTRRM
PVPERGWGSTPVRVCDACHRQGGTDTTNQVAVVEPRGLMARRVTEVAQSTLDMVTTAVDY
PLCFVKGVARPDYWIPDPQIMQCHQCSKAFTPSMSKHHCRACGQGVCSGCSSKSRPVPSR
GWDHPVRVCDSCASRKGSL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgtattgttgttgtcgggagtgggggaagtttctgctaccgtcagtctagggat
tgtttaataacaatgtccgaagtactgatgaaagaaatggaggaggtatcgctttgtcac
ataaaaacagaagaacacccggaaaatggtcggagttttcttttggttgacgaacaagaa
aatctgcaggtccatgatgaggctcagttcctggagtggctgagctgcggggacatgcag
ggcgtcaaggtcctctccatcttcggcaacacgggcgacggcaagtcccacaccctcaac
cacatcctgtttggcggggataccgtgttctacacctccaagtcccccagctcctgcacg
gtgggcgtgtgggccgcctttgaccccgggctgggcctggtggctctggacacagagggc
ctgctggggtctgcggccaaccagaaccagcacatgcgtctgctgctgaaggtgctggcc
gtatcggacgtggtggtgtaccgcacgcgggctgagaggctgcacaacgacatgttccag
ttcctaagcagtgcctcaggggcctacctgaagcacttcacccccgagctgcgcgccctc
tccagccgctgtggcatggatgtgcccctctcctccctggggccggcgatcatcgtgttc
caggagaccacccacacccagctactgggctatgagcgaacagatgtccctggctatgca
gacactcagctccagaggcgcttccatgacctgggcctgggtacagaggccttcagctca
gtgcagtacgtgggcacacagactatcactcctccgaccaactactctctgctcctggag
gctgtacgccagcaagtcaggaacactgccacacgatcgccccgccaaccggccatcgtc
ttcagcgctctgcaggccctgagtgacaggttctgtggggagatcttagacgacaagatc
cccctctactcctttttccctgacgaatacttcacctgctcttcagtctgcctcagctgc
aatatccgctgtaagaacgggatgaaccatctaagagacagggtccctcacctggcagac
ggactgtgtcagtacgctcaccagtacaacaacaaggttctcatctgcaagaggtgctat
gaggggggcagggaggttattgtcattcccaaaacctcagcctcatcagacaacccctgg
tttgggctggcgaagtacgcctggtctgggtatgtcctggagtgtggcagctgtggcatt
atctaccgcagccggcagtactggctgggcaaccagaacccagagtgcggcgtggtgcgg
cccgaggtcaaacacgtctgggaggggtctgaggccttcctgacagaccaccagaatgcg
gcccagagggtgcttgatgggatgaactttgtgatccagtctgtgtcggagtacagtacg
ggccccaccaaggctgtcacctcctggctcactgaccaggtggccccgcactactggaga
cccaacactgacatcaccgcgtgtcactgctgtaagaagccctttgaggaggcggagagg
aagcaccactgtcgttcgtgtggcgagggcttctgccaggcctgctccacccgcaggatg
cccgtgcccgagaggggctggggcagcacccccgtccgggtctgtgacgcctgccaccgc
cagggagggaccgacaccaccaaccaggtggctgtggtggagccgcgggggctgatggcc
cgcagggtgacagaggtggcccagtctactctagacatggtcaccactgcagtggactac
cctctgtgctttgtgaagggagtggcccggcctgactactggatccccgacccccagatc
atgcagtgccaccagtgcagcaaagccttcacccccagtatgtccaagcaccactgtcgg
gcgtgtggccagggtgtctgcagcggttgctcctccaagagccgccccgtgccctcccgt
ggctgggaccaccctgtccgcgtctgtgacagctgcgccagtcgcaagggcagcctgtga
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