Coregonus clupeaformis (lake whitefish): 121563797
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Entry
121563797 CDS
T08357
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2-like
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121563797
04082 Neuroactive ligand signaling
121563797
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121563797
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121563797
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2754
ATP-synt_8
Motif
Other DBs
NCBI-GeneID:
121563797
NCBI-ProteinID:
XP_041731439
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MALTVTLSLSLLVLSLSSPGTGAENAEERLVNYMLSPERYNKLIRPAVNKSQQVTISIQV
SLSQLISVNEREQIMTTNLWLFQEWNDYRLRWDPEKYEGIKKLRIPSQHIWLPDIVLYNN
ADGVYEVSFYCNAVVSNTGDIFWLPPAIYKSACAIEVQNFPFDQQNCTLKFRSWTYDHTE
VDLILTSDFASRDDFTPSGEWDIVSLPARKNEDPNDITYLDITYDFVIKRKPLFYTINLI
IPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLAVPLIGKYLM
FTMVLVTFSIVTSVCVLNVHHRSPSTHRMPDWVKRLFLLRLPAFLLMRRPGNNNVREKLR
RKHATTAAGNTTSGNTGNSRGGVKKRHSDIKLGGIQTDSDSFYVNEDSAQKFSWKVGDVS
GDGGIPGFRRRVAVQWDADLEEAVDGVRYIAEHMKTEDGDEGIIEDWKYVAMVIDRLFLW
IFILVCVVGTLGLFMQPLFQSYNTPTADSNEYGDF
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgacggtgactttatctctctctctccttgtcctatctctctcaagtccgggt
acaggagcggagaatgcagaggagcggctggtgaactacatgttgagtccagagcgctat
aacaaactgatccgtcctgctgttaacaagagccagcaggttaccatctctatacaggtg
tctctgtcacagctcatcagtgtgaatgagagagaacagattatgaccaccaacctctgg
ctgttccaggagtggaatgactacagactgagatgggatccagagaaatacgaaggcata
aaaaaactacgaatcccatctcaacacatttggcttcctgatattgttctctacaacaat
gcggacggggtctacgaggtctccttctactgcaacgccgtggtgtccaacacaggagac
atcttctggctcccgcctgccatctacaagtcagcctgcgccatcgaggtccagaacttc
ccattcgaccagcagaactgcacgctcaagttccgctcgtggacctacgaccacaccgaa
gtcgacctcatcctcaccagcgacttcgccagccgggacgacttcacgccgagcggcgag
tgggacatcgtgtcgctgcccgcccgcaagaacgaagaccccaacgacatcacctacctg
gacatcacctacgactttgtaatcaagcgcaagcctctgttctacaccatcaacctgatc
atcccctgtgtcctcatcacctctctggccatcctggtgttctacctgccctctgactgt
ggagagaagatgactctctgtatctctgtcctcctggccctcactgtgttcctgctgctg
atctctaagatagtaccgcccacctcgctggctgtgccgctcataggtaaatacctgatg
ttcactatggtattggtcaccttctccatcgtgaccagtgtgtgtgtcctcaacgttcac
caccgctccccgtccacccaccgcatgcctgactgggtcaaacgcctcttcctgctccgc
ctccccgccttcctcctcatgagacgacccgggaacaataacgtccgggaaaaacttcgc
cggaagcacgccactaccgctgccgggaacaccacctccgggaacactgggaattcccga
ggcggggtgaaaaagcggcattccgacatcaagctgggaggaatccagacagactcagac
tcgttctatgtgaacgaggattcagcacagaagttcagctggaaggtgggagacgtgtcg
ggggacggaggtattccggggttcaggcgtcgcgtggcggtccagtgggacgctgacctg
gaggaggcggtggacggagtgaggtacatcgctgaacacatgaagacggaggacggagat
gaagggatcatagaggactggaagtatgtagcgatggtaattgaccgtctgttcctatgg
atctttatcctggtgtgtgtggtgggaaccctgggtctcttcatgcagccccttttccag
agctataacactcctactgcagacagcaatgagtatggtgatttctga
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