Coregonus clupeaformis (lake whitefish): 121563804
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Entry
121563804 CDS
T08357
Name
(RefSeq) numb-like protein isoform X1
KO
K06057
numb
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121563804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121563804
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
121563804
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NumbF
PID
PTB
PID_2
Motif
Other DBs
NCBI-GeneID:
121563804
NCBI-ProteinID:
XP_041731448
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Position
5:complement(17932464..18000718)
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AA seq
681 aa
AA seq
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MSSSAEMGEAIELSNKEPQTPEMNKLRQSLRRKKPTYVPEASRPHQWQADEEAVRKGKCN
FPVRYLGLVEVEESRGMHVCEEAVKKLKISGKKTVKAVLWVSADGLRVVDDKTKDLIVDQ
TIEKVSFCAPDRNYDKAFSYICRDGTTRRWICHCFMALKDSGERMSHAVGCAFAACLERK
QRREKECGVTASFDASRTSFVREGSFRVTSSSQQEGGERDDIMKQLQDKKKEPPCTIPAI
PPGTSSPPEGAASPVGQGVEHAIPRRHAPIEQLVRQGSFRGFPALSGKNSPFKRQLSLRL
NDLPSNLQRKTADFQSKNPVPEMDLSVCGEADSSINALCSQINYSFTKPSEELFSNPTPN
GLPACTVPPAIPPPAAPLQATSSWVQAEPLVQSPLPVVHSGHRRTPSEAERWLEEVAKAV
KAQQQTPTLPPPPIQLTPAIPGPPMSSTAMSVPPMSGVPLLGASMPGATMPTSMQPFPLA
FDATPAPVGMYAQPPLQPAFVPMQAYMPALANSMTYSNASVPVVGITPSQMVANVFCTAG
GSTSGTSMGVGTGPKMGMLSGGHRHSFSGQPGGFPMPPFGAHPTVNGLPHNIPTSSLATI
TQNGTSSNGGSSTSSSWPPEGAQQANPPPANAQEVDRFEAKWAALETKSQPKEAPNPFSN
DLQKTFEIELKLGINPGQATA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgagcgctgagatgggggaggccatcgagctaagcaacaaggagccccagacc
ccggagatgaataagctgcgtcagagcctgcgcaggaagaagcccacatacgtgccggag
gccagtagaccccaccagtggcaggcagacgaggaggccgtacgcaagggcaaatgcaac
ttccccgtcaggtacctgggtctggtggaggtggaggaatccagagggatgcatgtgtgt
gaggaggctgtgaaaaagctcaaaattagtggcaagaagacagtgaaagcagtactgtgg
gtgtcggcagacggtctcagagtggtggatgacaaaaccaaggacctcatcgtagaccag
accattgagaaggtgtccttctgcgcgcccgaccgcaattatgacaaggccttctcctac
atctgccgtgacggcaccacacgccgctggatctgccactgcttcatggccctgaaggac
tcgggcgagcgtatgagccacgccgtgggctgtgccttcgccgcctgtctggagaggaag
cagcgccgcgagaaggagtgcggcgtcacagcctcgtttgacgccagccgcacctccttc
gtgcgcgagggctcgttccgcgtgacgtcatccagccagcaggaagggggcgagcgcgat
gacatcatgaagcagctgcaggacaagaagaaagagcccccgtgtaccatcccagccatc
ccccctggcacctcctcaccccctgagggcgcggcctcgcctgtggggcagggggtggag
cacgccatcccgcggcgccacgcgcccattgagcagctggtgcgacagggctccttccgg
ggcttcccggccctcagcgggaagaactcgccgttcaagaggcagctctcgctgcgcctc
aacgacctgccttccaacctgcagcgcaagaccgctgacttccagagcaagaacccagtc
ccagagatggatctgtcagtgtgtggagaggcagacagcagcatcaacgctctgtgcagc
cagatcaactactccttcaccaagccctctgaggaactcttctccaaccccacccccaac
ggcctgccagcctgcactgtgcccccagcgatcccccctccagccgcccccctgcaagcc
acgtcctcctgggtgcaagcggagcccctggtccagtcccctctgccggtggtccatagc
gggcacaggaggacaccctcagaggctgagcgctggctggaggaggtggccaaggccgtc
aaggcccagcaacagacccccaccctgcccccgccacccatccagctcacccctgccatt
ccaggtccacccatgtcaagcacagcaatgtctgtgccacctatgtcaggtgtgccccta
ttgggggcatccatgccgggggcaaccatgcccacttccatgcagccctttcccttggca
tttgatgccactcccgcgcccgtgggcatgtatgcccagccacccctgcagccagcgttt
gtacccatgcaggcctacatgcccgccctggccaacagcatgacgtactccaacgccagt
gtgcctgtggtgggcatcacgccttcccagatggtggctaatgtcttctgcacggcaggc
ggctctaccagcgggacttccatgggcgtgggcacagggcccaaaatgggcatgctcagt
ggcgggcaccgccactctttctccggccagccgggcgggttccctatgccacccttcgga
gctcatcccaccgtcaacggcctcccccacaacattcccacctcctccctcgccaccatc
acgcagaacggcactagcagcaacggcggcagcagcactagcagcagctggccaccggag
ggcgcacagcaggccaacccgcccccagccaatgcccaggaggttgatcgctttgaggca
aagtgggccgcgctggagaccaaatcgcaacccaaggaggcgcccaaccccttctccaat
gacttgcaaaagacctttgagatcgagcttaaactcggtattaacccaggtcaggccact
gcatag
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