Coregonus clupeaformis (lake whitefish): 121563906
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Entry
121563906 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-11
KO
K06087
claudin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272
Virion - Hepatitis viruses
cclu04382
Cornified envelope formation
cclu04514
Cell adhesion molecules
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121563906
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121563906
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121563906
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121563906
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121563906
04147 Exosome [BR:
cclu04147
]
121563906
04515 Cell adhesion molecules [BR:
cclu04515
]
121563906
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121563906
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
121563906
Exosomal proteins of colorectal cancer cells
121563906
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
L1 family
121563906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF5480
CyanoTRADDas_TM
Motif
Other DBs
NCBI-GeneID:
121563906
NCBI-ProteinID:
XP_045062255
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Position
22:complement(1632117..1642225)
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AA seq
218 aa
AA seq
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MANSCLQLSGFVMSCIGWVGILIATATNDWVVTCKYGMNTCKKMDELGAKGLWAECVIST
ALYHCISLTQILDLPAYIQTSRALMITGSLLGLPAVGMVLTAMPCISLGDEPQSAKNKRS
LLXGVLILLVALCGGVSTVWFPIGAHQDQGLMSFGFSLYAGWVGAAFCLLGGAMITCCST
EPSQHYNHHDNNRFYYSKGQVPGNPCSPSTNHAKSAHV
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacagctgtctccagctcagcggttttgtgatgagttgtatcgggtgggtcggg
atccttatcgccacggccaccaacgactgggtagtgacatgtaaatacggcatgaacaca
tgcaagaagatggacgagttaggagccaagggcctgtgggctgaatgtgtcatatcaacc
gccctctatcactgtatatcactgacacagatattggacctaccagcatacatccagacg
tcgagggcgttgatgataactggatccctcctggggctgcctgcggtggggatggtccta
acagccatgccctgcatctccctgggggacgagcctcagtcagccaagaacaaacgatcc
ctacttnggggagttctcatactgctagtggctctgtgtgggggggtgtcgacagtatgg
tttcctatcggagcccaccaggaccagggtctcatgtcgtttgggttcagcctgtacgct
ggctgggtgggcgcggccttctgtctcctgggaggggccatgatcacctgctgttctact
gaaccctcccaacactacaatcaccatgacaacaacaggttctactactccaaaggacag
gtgcctggcaacccctgttcaccctccactaaccacgccaagagtgcccatgtttag
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