KEGG   Coregonus clupeaformis (lake whitefish): 121563906
Entry
121563906         CDS       T08357                                 
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-11
  KO
K06087  claudin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272  Virion - Hepatitis viruses
cclu04382  Cornified envelope formation
cclu04514  Cell adhesion molecules
cclu04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    121563906
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    121563906
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    121563906
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    121563906
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cclu03037]
    121563906
   04147 Exosome [BR:cclu04147]
    121563906
   04515 Cell adhesion molecules [BR:cclu04515]
    121563906
Cilium and associated proteins [BR:cclu03037]
 Other cilia and associated proteins
  Stereociliary proteins
   121563906
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   121563906
  Exosomal proteins of colorectal cancer cells
   121563906
Cell adhesion molecules [BR:cclu04515]
 Immunoglobulin superfamily
  L1 family
   121563906
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 DUF5480 CyanoTRADDas_TM
Other DBs
NCBI-GeneID: 121563906
NCBI-ProteinID: XP_045062255
LinkDB
Position
22:complement(1632117..1642225)
AA seq 218 aa
MANSCLQLSGFVMSCIGWVGILIATATNDWVVTCKYGMNTCKKMDELGAKGLWAECVIST
ALYHCISLTQILDLPAYIQTSRALMITGSLLGLPAVGMVLTAMPCISLGDEPQSAKNKRS
LLXGVLILLVALCGGVSTVWFPIGAHQDQGLMSFGFSLYAGWVGAAFCLLGGAMITCCST
EPSQHYNHHDNNRFYYSKGQVPGNPCSPSTNHAKSAHV
NT seq 657 nt   +upstreamnt  +downstreamnt
atggcgaacagctgtctccagctcagcggttttgtgatgagttgtatcgggtgggtcggg
atccttatcgccacggccaccaacgactgggtagtgacatgtaaatacggcatgaacaca
tgcaagaagatggacgagttaggagccaagggcctgtgggctgaatgtgtcatatcaacc
gccctctatcactgtatatcactgacacagatattggacctaccagcatacatccagacg
tcgagggcgttgatgataactggatccctcctggggctgcctgcggtggggatggtccta
acagccatgccctgcatctccctgggggacgagcctcagtcagccaagaacaaacgatcc
ctacttnggggagttctcatactgctagtggctctgtgtgggggggtgtcgacagtatgg
tttcctatcggagcccaccaggaccagggtctcatgtcgtttgggttcagcctgtacgct
ggctgggtgggcgcggccttctgtctcctgggaggggccatgatcacctgctgttctact
gaaccctcccaacactacaatcaccatgacaacaacaggttctactactccaaaggacag
gtgcctggcaacccctgttcaccctccactaaccacgccaagagtgcccatgtttag

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