Coregonus clupeaformis (lake whitefish): 121563979
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Entry
121563979 CDS
T08357
Symbol
prom1b
Name
(RefSeq) prominin 1 b isoform X1
KO
K06532
prominin 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121563979 (prom1b)
04090 CD molecules [BR:
cclu04090
]
121563979 (prom1b)
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121563979 (prom1b)
CD molecules [BR:
cclu04090
]
Proteins
121563979 (prom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
Mucin
CENP-F_leu_zip
LRR_TTSS
Motif
Other DBs
NCBI-GeneID:
121563979
NCBI-ProteinID:
XP_045072336
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MLWRAGLVLLLCWGTTGELRHQPRDSPEHEDLQADPMSVGRRQQRSPLPVEPLDFGFVPS
GVYETHAYYEPGAIGVLFHMVHAFLYVVQPNPFPKDLIIKVIQQNMGGIKLEDYHKPENV
VLMLQTIYYEAGFLVLVSLACVFLVLTPIVGMCFCVCRCCENCGGEMHQRQRKNADCQRG
FFTTALIATSIFIMTGALIAQAANQNITSQIKSTRRFISTNMRDLKTFANNTPAQIDHLT
SQFTTAKNKVLSDLDNIGPLLGGRIQTQLEKEVVPSLDTALRMAGGKVENAIKAMRESKE
ALESVSSSLDVLQEGTSRLALRLAYERSSLSNTLSDPACTNGAVSYTCNNILFTLAQLRI
NSNFSGLPDVRLQLASLEIVLKTDLSNIVQKGYSSFNDTPRLVQQQTKNVVAALPRVKAI
LDKIGLEIIGFSKMFPVEASLANFTIFLSQGQKNMEAYYPQIDQMDFYRWIGCVAVLCTV
VLVLTFNFLGLLCGTCGYDKQATPTTRGCLSNTGGNLLMAGVGFSFIFAWALMGLVSAGF
VVGGNMEKLFCEPLANRQLFKIIDTPYMVHPAKKNFLPGMLFQNPNINLTVGSMYRDCYD
NNGLYHALQLETMFNVNTFLNTTVFNKDLVKVLEGVSIDLQSMVLLEQDGRDNLLTFSTA
GIGDISYDAYLAEVNKGVTLVDLLSFSNELEAQADLLPRGALENALKGHASSIRQIHREQ
VVPMEQAMKFVRARSSLSQSIRLLQRTAKELPVKVTDVLSAIDAAEYLITHNASHVVKQE
TDVYMRSLVGYFRQYTDWVKNSLTGEVAQCKPISNIMDSMEIVACSFIVDSVNTFWFGLS
GCCVFLIPSIILSVKLAKHYRRMDTEDVFEEGQENW
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggagagcggggctcgtgttgctgctgtgttggggcaccaccggcgagctacgt
catcaaccccgggactccccagaacatgaagacctgcaggccgaccccatgtccgtgggc
aggcggcagcagcggtccccgctgcctgtagaacccctagactttgggttcgtgccctcc
ggtgtgtacgaaacgcacgcctactacgagcccggtgccatcggtgttctgttccacatg
gtgcacgcgttcctttacgtggtccaaccgaaccccttccccaaagatctcatcataaaa
gttatccaacagaacatgggagggataaaactggaggactatcacaagccagagaacgtt
gtcttaatgctacagacgatctactacgaggcaggcttcctggtgttggtgagtctggcc
tgtgtgttcctggtgctgacccccatcgtaggaatgtgtttctgtgtgtgccgctgctgt
gagaactgtggaggggagatgcaccagagacagaggaagaacgcagactgtcagagagga
ttcttcaccaccgcgctcatcgccacctccatattcatcatgactggggcgctgatagcg
caggctgccaaccaaaacatcacgtctcagatcaagtcaacacggcgtttcatcagcacc
aacatgagagacctgaagaccttcgctaacaacacaccagcgcaaattgaccatctgacg
tcccagttcactacagctaagaataaagtcctgtctgacctggacaacatcgggcctctg
ttgggtgggaggatccagactcagctggagaaggaagtagttccttccctggacacagct
ctgcgcatggctggaggcaaagtggagaacgccatcaaagctatgcgtgagtctaaggag
gcgttggagagtgtcagttcttcattggatgttcttcaggagggaacgtctcgtctggca
ctccgtctggcgtatgaacggtcctccctgtccaataccctgtctgatccagcctgtact
aatggagctgtgtcatacacctgcaacaacatcctctttacactcgcacagctgagaatc
aacagcaacttctctgggttaccagacgtcaggctccagttggccagtttagagattgtc
ctgaagacagacctcagcaacattgtccagaagggttattcatccttcaatgacaccccc
agactggtccaacagcagactaagaatgtagtagcagctctgcctagagtgaaggccata
ctggataaaataggattagagataataggtttctctaagatgttcccagtggaagcctct
ctggccaacttcaccatcttcctgagtcagggccagaagaacatggaggcctactaccct
cagatagaccagatggacttctacaggtggatagggtgtgtggcggtgctgtgtacagtg
gttctggtcttgacatttaacttcctgggtctgttgtgtggaacgtgtggctatgacaaa
caggccacgcccaccacccgtggctgcctgtcaaacaccggaggcaacctgctaatggca
ggtgtagggttcagtttcatctttgcctgggcattgatggggctggtatcagcagggttt
gttgtcgggggcaacatggagaagctgttctgtgaaccgcttgctaacagacaactgttc
aagatcatagacactccctatatggtccatcctgccaagaagaacttcctgcctggcatg
ttgttccagaaccctaacatcaacctgactgttggaagcatgtaccgggactgctatgat
aacaacggcctgtaccatgctctgcagctggagaccatgttcaacgtcaacacattcctc
aacacaaccgtgtttaacaaggacctggtgaaggtgttagaaggtgtgagcatcgacctc
cagagtatggtgttactggagcaggatggaagagataacctgctaaccttctctaccgct
gggataggagatattagctatgatgcttacctggcagaggtgaataaaggtgtgactctg
gtggatctgctgtcgttttccaacgagctggaggcccaggctgaccttctgccgcgagga
gctctagagaatgctttgaagggtcatgccagcagcatcagacagattcacagagagcag
gtcgtccctatggagcaggccatgaaatttgtccgagcgcggagctccctgagccagagc
atccggctactgcagaggacagccaaggaactaccagtgaaggtgactgacgtccttagt
gccatcgacgcagcagagtacctcatcacacacaacgcatcacacgtggtaaaacaggag
actgatgtgtacatgcggagcctggttggatacttcagacagtacactgactgggtcaaa
aactctctgacaggggaggtggctcagtgcaagcccatcagtaacatcatggactccatg
gagatagtagcctgcagctttatagtcgactcagtgaacacgttctggtttggtctgagt
ggttgctgtgtgttcctgatccccagcatcatcctgtcggtcaaactggccaagcactac
aggaggatggacacagaggatgtgtttgaagagggccaagagaactggtag
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