Coregonus clupeaformis (lake whitefish): 121563992
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Entry
121563992 CDS
T08357
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC6
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121563992
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
121563992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
121563992
NCBI-ProteinID:
XP_045074682
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MFCWGDGSSGQFGLHFENVSVPIAGNILSDKVTEIACGEQHTLFLTVDGRILSCGRNSKG
QLGRQKNRDSKLPAPVEGLARVVSVACGQDHCVAVCASGQVYSWGAGGEGQLGIAPTTVS
KVPRPRPVPIPSPLPITVIQVACGNSHSLALTKGGQVFSWGLNSHGQLGLGKGVPLQPIP
ALVRSLTGVPVTQVAAGGTHTLALTLPGLVYCCGANRAGQLGLNRVDEKGRYNICAVPAL
RVLGVSFISCGEAHSAVLTKDGRVFTFGEGSRGQLGHDASANELIPKLVEGLDGLVSQIA
CGSHHTLVLGSSGKLWAFGSGVKGQLGTGNTEGSLRPTSVLLKRASGGAATVIHNDMKIS
VGWNSNFIYTAESSEREQPIGRLDEAKLQKWLTMEQGNAEAQREISLMFSTSSSLVASFT
KVNESPSTKAAGALTVDLEAASQAFDQLFNIPWIRKSVNILPLVDTLCVSAAVIKSPEIF
MILPTIPLLHDDQNVMNMVIALAIVIVEDLSETAKKTLKEWWSSMDTNIMTKHILMWKNA
MSFMLRNGLLVTHNPGVKFLLETLKYLHRANKRVGRTQKVPASTFYVEEINNIPMEDVKL
WRFWSKREDTQSTPVIFCRYPFVLNLICKMDIFINNARFTKGVHKLTHRLTVMCPSGTFR
DNPNSPPAPVFQLNLRRLSLIEDTFRQLGAADHDYFQRELVVQFVEDRKLSLVNIRDFFL
HVFEELLAPESEMFMYNDTKTLVWFPAKPRVEEKSYFLFGVLCGMALYNHNIVHLPFPLA
LFKKMVGVKPSLEDLREFDPVLGRSLRYLLEDYTDDDVEENLDMTFTVIWDDLKVELDPK
ETGKPVTSSNKKQFVDAYVNLAFNQSAEKVFEEFRRGFFKVCDRDVVEFFQPDELRGVMV
GKEDYDWDTLKQNTVYDGEYHARHPNIVTFWEAFEELTDDQKKAFLLFLTGCDRTPILGM
DKIQMTVAVLQNSTELHFPESLTCYFLLFLPIYPSKEMLLARLKEAVAHNRGFWKE
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgttctgctggggagacggttcgagtggacagtttggtctacattttgagaatgtgtct
gttcctatagcagggaatatattatctgataaagtcacagaaattgcttgtggggagcaa
cacactttatttctcacggtagatggcaggatcctatcatgcgggcgcaactcaaaggga
caacttggcagacagaagaacagagattcaaaactaccagcgccagtggagggtctggcg
agagtggtctctgtggcttgtggtcaggaccactgtgtagctgtgtgtgcatcaggacag
gtgtactcctggggggcagggggggagggacagctgggcatcgcccctactactgtctcc
aaagttcccagaccaagaccagttccaataccttcgcccttgccaataacagtgatacag
gttgcttgtggaaattcccattctttggccctgactaaagggggacaggtgttctcatgg
ggtctgaacagccatggacagctgggcctggggaagggggtgcctctgcagcccatacct
gccctggtgcgctccctcactggggtcccagtgacccaggtagcagccggaggaacccac
actctggccctcaccctcccaggcctggtctactgctgtggggcgaacagggctgggcag
ctgggactcaaccgtgtggatgagaaaggccggtacaacatctgtgcagtgcctgctctc
agagtcttgggggtttccttcatcagctgtggagaggcacattctgctgttctcaccaag
gatggacgggtgttcacctttggagagggaagccgaggccagcttgggcacgacgcatca
gctaacgaactcatacccaaactggtggagggcctggatggactggtctcacagatagca
tgtggcagccatcacaccctggtgctgggatcctcaggtaaactctgggcctttggcagt
ggggtcaaaggtcagctagggactggcaacacagagggcagcttgcgacccacctcagtg
ctgctgaaaagggcttctggtggggcagcgacagtcatacacaacgacatgaagatatca
gtgggatggaattcaaacttcatttacaccgctgagagttctgaaagagaacagccaatc
gggaggttagatgaagccaagctgcaaaaatggctgacaatggagcaaggaaatgcagag
gcgcaaagagaaatatccttgatgttctcaacaagttcaagtcttgtggccagtttcacc
aaagtcaatgagtctccatcaactaaagctgcaggagctttgacagtggacctagaggct
gctagccaggcttttgatcagctcttcaacataccatggatcaggaaatcagtaaatata
ttgccactggtggacactctttgcgtttcagcagctgtcatcaaatcaccagagatcttt
atgatactacccacaatccctcttctccacgatgaccagaacgtcatgaacatggttata
gctttagcaatagttatcgttgaggatctgagtgagacagccaagaaaactttaaaagag
tggtggtcctcgatggacacaaacatcatgactaagcacattctgatgtggaagaatgcc
atgtcattcatgctgaggaatggtcttctggttacccacaaccccggagtcaaattcctg
ctggaaaccctcaagtacctccacagagcaaacaaaagggtcggaagaacccagaaagtt
ccagccagtaccttttatgtggaagagatcaacaatattcctatggaggatgtgaagctt
tggcgtttttggtcaaaaagggaggacacgcagtcaacacctgtcatcttttgccgttac
ccatttgtgttgaatctgatctgcaagatggacattttcatcaataacgcacgttttaca
aagggggttcacaaactcacccaccggctgacagtgatgtgtccttctggaacgttccga
gacaacccaaactctccccctgctccagtcttccagctaaacctaaggcgcctatcactc
atcgaagacaccttcagacaactgggtgctgcagatcacgattacttccagagagaactt
gtggtgcagtttgtggaggacaggaagctgtcgctcgtcaacataagggacttcttcctc
catgtgtttgaagagctgttggcaccagagtctgagatgttcatgtacaacgacaccaag
acactggtctggttccctgccaagcccagagtggaggagaagagctacttcctgtttggt
gtcttgtgtggcatggccctgtacaaccacaacattgtacacctgcccttccctctggcc
ctgttcaagaagatggtgggggtcaagccctcactggaggacctgagagagtttgatcct
gttttaggaaggagtttgcggtacctcttggaggactacactgatgatgatgttgaagaa
aacctggacatgaccttcaccgtgatctgggatgacctgaaggtggagcttgatcccaaa
gaaacaggaaaaccagtcacaagttctaacaagaagcagtttgttgatgcctacgtgaac
ctcgccttcaaccaatcagcggagaaggtgtttgaagagttcaggagaggcttcttcaag
gtgtgtgacagagacgtggtggagttcttccagcctgacgagctcaggggagtcatggtg
gggaaagaggactacgactgggacacgctcaaacagaacactgtgtatgatggagagtac
catgccagacatcccaacatcgtcacattctgggaggcttttgaggaactgacagatgac
caaaagaaagctttcctcctgttcctgacgggctgtgatcgcactcccatcctgggcatg
gacaagatccagatgactgtggcagtcctgcagaactctactgaactacatttcccagaa
tcccttacctgctacttcctactgtttctgcccatctacccctccaaggagatgctgctg
gccaggctcaaagaggcggtggcccacaacagaggcttctggaaggagtaa
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