Coregonus clupeaformis (lake whitefish): 121564201
Help
Entry
121564201 CDS
T08357
Name
(RefSeq) WD repeat-containing protein 20-like
KO
K24731
dystrophia myotonica WD repeat-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121564201
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
121564201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WD40_Prp19
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_EML
WDR55
PD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
121564201
NCBI-ProteinID:
XP_045071625
LinkDB
All DBs
Position
5:18545070..18550633
Genome browser
AA seq
684 aa
AA seq
DB search
MPIASISIVVSRIISRSKCQFPVWLVCRLLKMAGDGGALKDINEIKSQFRTREGFYKLLT
LSDSQQRGGLPRGLSAGTTVGPGGGVGLVQGPGAASSSNAAASSSPAGFLPPVRVSMVKL
QPEDPSEESERVCFNIGRELYFYTYTNIKKAVDLSKPIDKRIYKGTQPTCHDFNQYSATA
DSVALIVGFSAGQVQYLDPIKKETSKLFNEERMIDKSKVTCLKWLPKSENLFLASYASGH
LYLYNVEHPCGTAAPQYSLLRQGEGFAVYACKTKTPRNPLLRWAVGDGGLNEFAFSPDGV
HMACVGQDGCLRVFHFDSMELQGVMKSYFGGLLCVSWSPDGKYLATGGEDDLVTVWSFAE
SRVVARGHGHKSWVNVVAFDPFTTSLEDEEPMELSGSEEDLQQGPLHFGRVRTSSTLSRL
SRHSSKGGSPSVTYRFGSVGQDTQFCLWDLTDDVLYPRLPLSRALTNTFGPTIPPSVSST
INNTTGGGSGGVVGGGGVEGHHHPTTNPHQPPTMPLPLPRSLSRSNSLPHPAVANVSKGQ
STTEGGGGSGGGNSTPFSIGRFATLSLQERKSDKSGVGGEKEHKRYHSLGNISKTNDKIN
VAPRSSRLDAAKVLGTTLCPRMHEVPLLEPLVCKKIAHERLTVLVFMDDCIITACQEGLI
CTWARPGKANLTAQNGNSPSGTVV
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcgcttccatttccattgtagtttcgcgtattatttccaggtcaaaatgtcag
tttcctgtgtggcttgtttgtaggctactaaaaatggccggtgatggaggcgctctgaag
gatatcaatgagattaaatcccagttcaggactagagagggtttttacaaactactgact
ctctcggattcacaacaacgaggtggactaccacggggtctgtccgcaggtaccacggtg
ggtcccgggggtggtgtaggtctggtgcaggggcccggagctgcctcttcctccaatgcc
gcagccagctcttctccggcgggcttcctacctcctgtcagggtctccatggtgaagctt
cagccggaggacccgagcgaagaatccgagagagtgtgttttaacatcggaagagagctt
tatttctacacctacacaaatatcaagaaggctgtggacctcagtaaacccatagacaag
cgtatctacaagggcacccagcccacctgccatgacttcaaccagtactctgccacagca
gacagtgtggccctcattgtgggcttttcagcaggccaggttcaatacctagaccccatt
aagaaggagacaagcaagctcttcaatgaggagaggatgatagacaagtccaaggtaacc
tgtctgaaatggctgcccaagtcagagaatctgttcctggcttcttacgccagtggccac
ctctacctctacaacgtggagcacccgtgtggcactgccgccccgcagtactccctgctc
cgccaaggcgagggctttgccgtctacgcctgcaagacgaagacgccccgaaacccactg
ctgcgctgggccgtgggcgacggaggcctcaacgagtttgccttctcgccggacggcgtg
cacatggcgtgtgtgggccaggacggctgcttgcgcgtcttccactttgactccatggag
ctgcagggtgtgatgaagagctacttcggcggcctgctgtgcgtctcctggagccccgac
ggcaaatacctggccacgggcggcgaggacgacctggtgacggtgtggtcgttcgcggag
agccgcgtggtggcccggggacacggtcacaagtcatgggtgaacgtggtggcctttgac
cccttcaccaccagcctggaggacgaggagcccatggagctgagtggcagcgaggaggac
ctacagcaggggccgctgcactttggccgtgtgcgcaccagcagcacgctgtcacgcctc
tcccgccacagctccaagggcggctcgccctctgtcacctaccgcttcggctcggtgggc
caggacacccagttctgcctgtgggacctgacggatgacgtgctgtacccacggctgccc
ctgtcccgtgccctcaccaacaccttcggccccaccatccccccctctgtcagcagcacc
atcaacaacactacaggcggagggagtggaggggtcgtaggaggaggaggggtagagggc
caccaccaccccaccactaacccacaccagccccccaccatgcccctgccactcccccgc
tccctgtcgcgctccaactccctcccccaccccgccgtggccaacgtctctaagggccag
agcacgacggagggcgggggagggagcggagggggcaactccacccccttcagtatcggc
cgcttcgccacactttccctgcaggagcgcaagtcggacaagtctggggtgggcggggag
aaggagcacaagcgctaccatagcctgggcaacatcagcaagacaaacgacaagatcaac
gtagcgccacgcagcagtcgcctggacgccgccaaggtgctgggcaccaccctgtgcccg
cggatgcacgaagtgcccctgctggagcccctggtgtgtaagaagatcgcccacgagagg
ctgaccgtgctggtgttcatggacgactgcatcatcaccgcgtgccaggagggcctcatc
tgcacctgggcacggccgggtaaagcgaacttgacagcacagaatgggaactctcccagt
ggcacggtggtatag
DBGET
integrated database retrieval system
