Coregonus clupeaformis (lake whitefish): 121564248
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Entry
121564248 CDS
T08357
Symbol
clstn3
Name
(RefSeq) calsyntenin-3
KO
K22661
calsyntenin 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121564248 (clstn3)
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Cadherin related
121564248 (clstn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
121564248
NCBI-ProteinID:
XP_045073673
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MDRMSFLSFLLLCLTSVANGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPSGSSSVQFEAVVLDRSTGEGLIRSKEPLDCESQREHSFTIQAYDC
GEGPDGANSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEALDADCS
PQYSQICFYDIITPNVPFVIDNDGNIKNTEPLDSKRQRVHTFWVTAFDCGKNRAQADAQV
VVTVKPSCKPGWISWSKRVEYTPGSGSIPLFPSLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTSALPTLPSSDSSLVFSFNGSTHIAV
VPDSVAAAVSGDHFTLQLWMRRGGINTQPPTNQARGNRREEETIVCSTVKNDDSFSHYSL
SVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTFDPAL
IHDNGAIPNPAPRQRLVIGACWETEDKQKDILNNTIPEWKDTGKYVGGYRGLLSGVTVRP
GSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAVQQVT
YRNSLRFATPGVRPLKLTTSLRCFNEESCLTLRQLEGYLVVLQPDAPQISLSGVGPHLAR
PAPEFEGPRGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPLGEEL
NPEREELLMDMDALRERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSARFERR
FRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHSGELSGHTLPN
PHHNSVVPGAATVIIMVCVGFLVIMVILGVFRIRSIHRRGEGARGGSKEDSGQWDDSALT
IIVNPMESYESRMGISADTEGEGEEDEEVVESPDDANDDQRIIIIKKEGRDSNPRRY
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgagttttctctccttcctcctcctttgcttgacttcggttgctaatggc
aacaaagccaataaacacaagccatggatcgagacggagtaccagggtatcgtcatggag
aacgacaacaccgttcttctcaacccaccactgttcgccctggataaagacgctccactg
cactatgcaggtgagatctgtggcttccgggtgcacaatgggccctcaggatccagttcg
gtccagtttgaggcggtggttctggaccgctcgacaggggagggcctgatccgttctaaa
gagcccctggactgtgagagccagcgggagcacagcttcaccatccaggcctatgactgt
ggagagggccccgatggagccaacagcaagaagtcccacaaagccacggtgcatgtacgt
gtgaacgacgtaaacgagttctccccagtgttcgtggagcgtcgctacgaggcctccgtc
ccagaaggccgtctgtttgaccgcatcgtgcgcgtggaggccctcgatgcagactgctct
ccgcagtacagccagatctgcttctacgacatcatcacccccaatgttccctttgtcatc
gataacgatggtaacattaagaacacagagccattggattcgaagcgccagcgcgtccac
accttctgggtgaccgcgttcgactgtggcaagaaccgcgctcaggccgacgcccaggtc
gtcgtcacggtcaaaccgtcctgcaaacccggctggatcagctggtcgaagcgggtagag
tatacccccgggtcaggcagcattcccctgttccccagtttgcacctggagacctgcgaa
gagactgtgtggaacatccaggccaccgtagagctgcagactggccatattgggaagggc
tgtgaccgggacagctactcagaccgatcagtacgcagactctgtggtgctgtgagaggt
gaagtggacttactcccgcccccgtccccagcagccaattggacctcagccttgcccacc
ctcccttcttctgattcgtccctggtgttctccttcaatggctccacccacattgccgtg
gttcctgactctgttgccgcggccgtatctggagaccattttaccctccagctgtggatg
cgaaggggtgggatcaacacccagcctccgactaatcaggccagaggaaaccgcagggag
gaggagactatcgtctgcagtactgtcaagaatgatgactccttctctcactactctctc
tccgttcacggctgccgtctctctctcttctactggcccgacgtctccgctgcgcggccc
gtgaaattcctctggaaactggagcaggtgtgtgacagcgagtggcatcacctgtccctc
agtgtccagttcccctctgtgacactgtatgtggatggagtcaccttcgaccccgccctc
atccacgacaacggagctatacccaaccctgccccacgacagcgactggtcattggcgcc
tgctgggagacagaagataaacagaaggacatccttaacaacaccatccctgagtggaaa
gacacagggaagtacgtgggtggttaccgtggcctgttgtcaggggtgacggtgcgtcca
gggagtgtggagccccacagtgtggtggagtgtctgtacgcctgcagggaggggctggac
tttggagacctagagaccttgggctcaggcatgaaggtgcatgtgaaccccagtcagtct
gtgctggttctggagggtgatgacattgagagcttcaacagggctgtgcaacaggtcacc
tacaggaactctctccgcttcgccacccctggagtcaggccactcaaactgaccacctcc
ctcaggtgtttcaatgaggagagttgtcttaccctcaggcagttggagggctacctggtg
gtccttcagcctgacgcccctcagatctccctgtctggtgtcggcccccacctggcccgc
cccgcgcctgaattcgagggcccacgtggtgtacccctcttcccagagctgaggatcgtg
tgctccctgtctcatgctgttaacacagccgctcagggcatggagggaggagctctgatg
tcagacgccgtggcccacactctggacggctgtgaggtccaacccctgggggaggagcta
aacccagagagggaggagctcctgatggacatggatgccctgagagagaggggtctggag
ataatcaacaccactgcttacatcgctatcacaggagctgagtccatctccgtgtatgag
gatgtccttcggtccgtccgttaccggctggctaaaggctcggcccgctttgagaggcgg
ttccgtctgtcctgctccgagatgaatggcagatacaccagcaacgagctcacactggag
gtgaacttcctgcactccctggacagtctgtaccacccgtctcacctcctggcctcccaa
cagcagttccttcacccgtctcaccactctggggagctgagcggacacaccctgcctaac
ccccaccacaactcagtggtgccaggagcggccacagtcatcatcatggtgtgcgtgggc
ttcctggttatcatggtgatcctgggagtgtttcgaatccgctccatccaccgccgtggt
gagggcgccaggggagggtctaaggaggatagcggccaatgggatgactctgccctcacc
atcatcgtcaaccccatggagtcctatgagtctcgaatgggcatctcagccgacaccgaa
ggtgagggggaggaggacgaggaagtggtagagtcgcccgatgacgccaacgacgaccag
cgaatcatcatcatcaagaaagagggcagagacagcaacccccgtcgctactaa
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