Coregonus clupeaformis (lake whitefish): 121564294
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Entry
121564294 CDS
T08357
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-3-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121564294
04082 Neuroactive ligand signaling
121564294
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121564294
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121564294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Red1
Motif
Other DBs
NCBI-GeneID:
121564294
NCBI-ProteinID:
XP_045072017
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MNPAARGTLLLLVFVLIMQDCFSSKGEDRLFRRLFRRYNQFIRPVENVSDPVTVEFEVSM
SQLVKVDEVNQIMETNLWLRHIWNDYKLSWAPVEFDGIEFIRVPSNKIWRPDIVLYNNAV
GDFLVEDKTKALLKFDGTVTWVPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKID
LVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINL
IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL
LFTMIFVTLSIVITVFVLNVHYRTPMTHTMPGWVRSVFLRVLPRIMLMRRPIDQDGKALC
SDSGEERGAGGGGGGGGGGGAGGGGKGGKKRKNSLTQGGNCLEFADNKLTDRGCGERGGK
KCPCPCQHGKETPETADPGKLSHQLSPQSINTVVAYSVLSPEIKQAIESVKYIAENMRSR
NKAKEVEDDWKYVAMVIDRIFLWVFVTVCILGTLGLFLQPVIGFLS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagctgcacgagggactttgctgctcctcgtctttgtgttgataatgcaagac
tgcttctcctctaagggggaggacaggttgttcaggaggctgttccggaggtacaaccag
tttatcaggccggtggagaacgtctcagaccccgtcaccgtggagtttgaggtatccatg
tcacagctcgtcaaagtggatgaagtgaatcagatcatggagacaaatctgtggctgaga
cacatctggaacgactacaaactgagctgggccccagtagagtttgatgggattgagttc
atcagagttccatccaacaagatctggagacctgacatagtgctgtataacaatgcggtg
ggagacttcctggttgaagataagaccaaagctctgttgaagtttgacggtacagtcacc
tgggttccccccgccatctttaagtcctcctgcccaatggacatcacctacttccccttc
gactaccagaactgctccatgaagttcggctcctggacctacgacaaggccaagatcgac
ctggtgctcattgggtcaaaggtcaacctcaaagacttctgggagagcggcgagtgggag
atcatcgatgctccgggctacaagcacgacatcaagtacaactgttgcgaggagatctac
ccagacatcacctactccttctacatcagacgcctgcctctcttctacaccatcaacctc
atcatcccatgtctcctcatctcttttttaacagtcctggtcttctacctgccctccgac
tgcggagagaaggtgaccctctgtatctcggtcctcctctccctcactgtgttcctcctg
gtgatcactgagaccatcccgtccacgtccctggtcatccccctcatcggggagtacctc
ctcttcactatgatcttcgtcaccctctccatcgtcatcaccgtgttcgtcctgaacgtc
cactaccgtacaccaatgacccacaccatgccaggctgggtcaggtccgtcttcctcagg
gtgctacccagaatcatgctgatgagacggcccatagaccaggacggcaaggccctctgt
tcagacagcggggaggagagaggagcagggggaggaggaggaggaggaggaggaggagga
gcagggggaggagggaaaggaggaaagaagaggaagaatagtctgacgcagggcgggaac
tgcctggagttcgcagacaacaaactgactgacagaggatgtggagaaagagggggtaag
aagtgcccttgcccctgccaacatgggaaggagaccccagagacagcggatccggggaaa
ctgagccaccagctaagtcctcagagcatcaacacggtggtggcctactccgtcctgtcc
ccggagattaaacaggccatcgagagcgtcaagtacatcgccgagaatatgaggagccgc
aacaaggccaaagaggtggaggatgattggaagtatgttgccatggtgatagacaggatc
ttcctgtgggtgtttgtgacggtgtgcatcctcggaaccctcggcctcttcctgcagccc
gtcattggcttcctgtcataa
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