Coregonus clupeaformis (lake whitefish): 121564566
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Entry
121564566 CDS
T08357
Symbol
kitb
Name
(RefSeq) LOW QUALITY PROTEIN: KIT proto-oncogene, receptor tyrosine kinase b
KO
K05091
proto-oncogene tyrosine-protein kinase Kit [EC:
2.7.10.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121564566 (kitb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cclu04090
]
121564566 (kitb)
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121564566 (kitb)
Protein kinases [BR:
cclu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
121564566 (kitb)
CD molecules [BR:
cclu04090
]
Proteins
121564566 (kitb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR1-3_N_Ig-like
C2-set_2
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
121564566
NCBI-ProteinID:
XP_045066631
LinkDB
All DBs
Position
35:complement(38835154..38893959)
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AA seq
973 aa
AA seq
DB search
MGDNWILIIMPFLLCPLTGWSNPVIFPSGPHLVVPKGGALELRCHDNTNADANTPSTVVS
GGVRWQRERGRRLEGEVEEGGGVVFIRVQSAQGYHMGRYTCINNNTKERSSIYVFVKDPQ
SPFQRSMVNGILVRVGEDLTLPCLVTDPDVTLVTLQTCDLHPVPSDLHYHTDPQRGVVIG
NARKEYEGCYVCVGELGGATVRSSQYTVDIRLVPEQPPVISLSQRERVILRRGEQFEITC
RSSNLNPDFSIKWDFPVGARAFQDHTSHILSGSRGYQRSASLSIASVNQSDAGAYRCHAH
NERGATADTLQLDVRERGFISMLGDSRPSQFAVREGESLSLRVELESYPRPGTLSWAYNG
KTLHNTTEHVITVHRDRYRYVSELRLVRVHGSEGGIYTFLANHEDASVNQSFPVYVNSKP
VIISQEGPVDGQVRCVAAGYPAPKISWFYCELPHTRCSHLTNATQWEQQEVATVHGIQSA
FGSSEVESRLNVTKGDTHTHYHTLECVATVQGEQAYTLFSISERTVAHKLFTPLLTGVVV
TSVILSIILVVLLYKYLQKPKFQIQWKVIDSIHGNNYIYIDPTQLPYDPKWEFPRQKLRF
GKILGSGAFGKVVRATAYGLCSADSVTTVAVKMLKPSAHSTEKEALMSELKVLSYLGNHV
NIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRETFFSAQAADGYYRNINNHQEPQRD
GNGNGYMPMRTSEKDRTSSQSDDKGCLSIDDLSVDTDDLLSFSYQVAKGMEYITSKNCIH
RDLAARNILLTQGRVAKICDFGLARDITTDSNYVLRGNARLPVKWMSPESIFDCVYTLES
DVWSYGILLWEIFSLGSSPYPGMQVGSAFYRMIQEGHRMNRPEVAPREIYDMMLSCWSED
PLKRPSFRKLVERTELLLSENTKNVYLNLSYRAVPPDQQRAASQRLSSVCSTTAPTQPLL
LNTADVFLDYDTV
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaactggatcctaattatcatgccgtttctgttgtgtccgctgacgggctgg
tctaatcccgtcatcttcccgagtggacctcacctggtggttccgaaaggcggggctctg
gaactccgctgccatgacaacaccaacgctgacgccaacactccatcaactgttgtctca
gggggggtgaggtggcagagagagagggggaggaggctggagggggaggtagaggaggga
ggaggggtagtgtttattagggtgcagtctgcccagggatatcacatgggacgatacacc
tgcatcaacaacaacaccaaggaacgctcctccatttacgtctttgtgaaagacccccag
agtccgttccagcgttctatggtgaatggcattctggtccgcgtcggggaggacctgact
ttaccatgcctggtcaccgaccctgatgtgaccctcgtgaccttacagacctgtgactta
catcctgtaccctccgacctccattaccacaccgacccccagcgcggcgtcgtcatcggt
aatgccaggaaggagtacgagggttgctacgtatgcgtgggcgagctgggaggagccacc
gtgaggtcgagccagtatactgtggacatacggctagtccctgagcagcctccagtgatc
agtctgtcccagagagagagggtgatcctgaggagaggagagcagtttgagatcacctgc
agatcctcaaacctcaaccctgacttcagcattaagtgggacttccctgttggagcacgt
gccttccaggaccacacctcccacatcctgtctggttcccgtggataccaacgctccgcc
tccctctcgatcgcctctgtcaaccaatcagacgccggggcataccgatgccacgcccac
aatgagaggggcgccaccgccgataccctgcagctggatgtccgtgagcgaggcttcatc
agtatgctgggtgactcccggcctagccagtttgctgtcagagaaggggagagcctaagc
ctcagggtagagttggagtcctaccccagacctggcactctgtcctgggcttacaacggc
aagaccctccacaacaccacggagcacgtcatcactgtccatcgagacagatacaggtac
gtcagtgagctgcggttggtgagggtccatgggtcagagggcgggatctacaccttccta
gccaatcacgaggacgcctctgtcaatcaatcattccctgtctatgtgaacagtaagccc
gtcatcatttcccaggagggaccagttgatggacaggtgcgctgcgttgccgccggttac
ccggcccctaaaatcagctggttctactgtgaactgccccacacacggtgttcccacctg
accaacgccacccaatgggagcagcaggaggttgccacggtacacggtatccagtcggcc
ttcggcagcagcgaggtggagagccgactgaacgtcacgaagggagacacacacacacac
taccacacgttggagtgtgtggccaccgtgcagggcgagcaggcttacacactgttctcc
atcagcgagcgcaccgtggcccataagctcttcacccctctgctgactggtgtggttgtt
acatctgtaatactgagcatcatactggtggttctcctctacaaataccttcagaagccc
aagttccagatccagtggaaggtgattgacagtatccacggcaacaactacatctacatc
gatcccacccagcttccctacgaccccaagtgggagttccccaggcagaagctgcgcttt
ggtaagatcctgggttcgggggcctttggtaaggtggtgagagccacagcctacggactg
tgttctgctgactccgtcacgactgtcgctgtcaagatgctcaaaccgagcgcccactcc
accgagaaggaggctctgatgtcggagttgaaggttctcagttacctaggcaaccatgtc
aacatcgtcaacctgctgggagcttgcactgtgggagggccgacgctggtgatcacagag
tactgttgctatggagatctgctcaacttcttgcgtaggaagagagagacgttcttcagc
gcccaggcagctgatgggtactaccgaaacatcaacaaccaccaagaaccacagagagat
gggaacggtaacggttacatgcctatgcgtacgtctgagaaagacagaacgtcctcccag
tcagatgataaggggtgtctgagtatagatgacttgtcggtggacacagatgatctactg
agcttctcctaccaggtggctaagggaatggagtacatcacctccaagaattgtatccac
agagacctagcagccaggaacattctgctgactcagggtagagtagctaagatctgtgac
ttcggattggcccgagacatcaccaccgactctaactacgtcctcagaggcaatgcccgt
ctcccagtgaagtggatgtctccagagagtatctttgactgtgtttacaccttggagagt
gatgtctggtcatacggtatcctgctctgggaaatattctctttaggtagcagtccgtat
cctggtatgcaggtgggttcagcgttctacaggatgatccaggaaggacacaggatgaac
agacctgaggtggctcccagagaaatttatgacatgatgttgtcctgttggagtgaggat
cctctgaagagaccttcctttaggaaactagtagagaggaccgaactactgctgtcagaa
aacaccaagaacgtgtacctgaacctgagctacagagctgttcctccagaccagcagagg
gcagcgtctcagagactgagctcagtgtgcagcactacagccccgacacaaccactactg
ctgaatactgctgatgtgttcctggactacgacactgtctga
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