KEGG   Coregonus clupeaformis (lake whitefish): 121564802
Entry
121564802         CDS       T08357                                 
Name
(RefSeq) interferon a3-like
  KO
K05414  interferon alpha
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060  Cytokine-cytokine receptor interaction
cclu04217  Necroptosis
cclu04620  Toll-like receptor signaling pathway
cclu04621  NOD-like receptor signaling pathway
cclu04622  RIG-I-like receptor signaling pathway
cclu04623  Cytosolic DNA-sensing pathway
cclu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    121564802
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    121564802
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    121564802
   04621 NOD-like receptor signaling pathway
    121564802
   04622 RIG-I-like receptor signaling pathway
    121564802
   04623 Cytosolic DNA-sensing pathway
    121564802
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    121564802
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cclu04052]
    121564802
Cytokines and neuropeptides [BR:cclu04052]
 Cytokines
  Interferons
   121564802
SSDB
Motif
Pfam: Interferon
Other DBs
NCBI-GeneID: 121564802
NCBI-ProteinID: XP_041731813
LinkDB
Position
Unknown
AA seq 186 aa
MGSINLWMFLVLTICTWHKTIGCTWMRTLPRSPSMFQVFSKNTITMLQKMGHEVSRETQI
TFPDKQYRQVDNFKADEQIVFISQTLKAIKKLYSSGKYESTAWDQKGVDRFMNDLHRQTS
ELDQCVKAMKTRLSKYVKRVNKKMSLHFKFLNNYLKREKHSASGWEDVRTVVLAHLRRLD
TTLSSQ
NT seq 561 nt   +upstreamnt  +downstreamnt
atgggttcaatcaacctttggatgttcttggtcctgacgatttgcacctggcataaaacc
atcggatgcacttggatgaggacactgcctcggtctccgagcatgttccaagtgttcagc
aaaaacaccataacgatgcttcagaaaatgggtcatgaagtctctcgagaaactcagatc
actttccctgacaagcaatacagacaagtcgataatttcaaggctgacgaacagattgtc
ttcatttcgcaaactctgaaagctataaagaaattgtacagcagtggcaaatatgagtcc
accgcctgggaccagaaaggagttgacaggtttatgaatgacctgcatcgccagacctcg
gagctagaccaatgcgtaaaggctatgaaaactagactatcaaaatatgtcaaaagagtg
aacaaaaagatgagccttcacttcaagttccttaacaattacttgaaacgcgagaaacac
agcgcaagcggctgggaagacgtaaggacagttgtgctggcacacctacgaagactagac
acaacattaagtagccaatga

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