Coregonus clupeaformis (lake whitefish): 121564805
Help
Entry
121564805 CDS
T08357
Name
(RefSeq) interferon a3-like isoform X1
KO
K05414
interferon alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04217
Necroptosis
cclu04620
Toll-like receptor signaling pathway
cclu04621
NOD-like receptor signaling pathway
cclu04622
RIG-I-like receptor signaling pathway
cclu04623
Cytosolic DNA-sensing pathway
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121564805
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121564805
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121564805
04621 NOD-like receptor signaling pathway
121564805
04622 RIG-I-like receptor signaling pathway
121564805
04623 Cytosolic DNA-sensing pathway
121564805
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121564805
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121564805
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Interferons
121564805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Exo84_C
Erf4
Motif
Other DBs
NCBI-GeneID:
121564805
NCBI-ProteinID:
XP_045074590
LinkDB
All DBs
Position
Unknown
AA seq
175 aa
AA seq
DB search
MYTMQSWTCIFLIICSMQSVCHCCDWIRHHYGHLSAEYLSLLDQMGGDITKQNAPVFFPT
SLYRHIDDAEFEDKVRFLNETIYEITQLFDGNMNAVTWDKKNLDDFLNILERQFENLNSC
VSPAMKPERRLKRYFKKLNRKVLRKMNYSAQAWELIRKETKRHLQRLDILAAQMY
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtatacaatgcagagttggacgtgtatttttcttattatttgcagtatgcagagcgtg
tgtcattgctgtgactggatccgacaccactacggacacttgagcgcagaatacctttcc
ctgctggaccagatgggaggagatatcacaaagcagaatgcccctgtctttttcccaaca
tcactttacagacacatagatgatgctgagtttgaggacaaagtcaggttcctgaacgag
accatctatgaaatcacacaactatttgatgggaatatgaatgctgtcacctgggacaag
aaaaacctggatgatttcctcaacattcttgaacgccaatttgagaaccttaattcctgt
gtatcacctgccatgaaacctgagaggagactgaaacggtacttcaagaagttgaatagg
aaggttctgagaaaaatgaactacagtgcacaggcgtgggagctcatcaggaaagagacg
aaacgtcatctgcaaagattggatatccttgcagcacagatgtactga
DBGET
integrated database retrieval system