Coregonus clupeaformis (lake whitefish): 121564986
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Entry
121564986 CDS
T08357
Symbol
rbm26
Name
(RefSeq) RNA-binding protein 26
KO
K13192
RNA-binding protein 26
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121564986 (rbm26)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121564986 (rbm26)
03041 Spliceosome [BR:
cclu03041
]
121564986 (rbm26)
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121564986 (rbm26)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
121564986 (rbm26)
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121564986 (rbm26)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup35_RRM_2
RRM_1
RRM_Nup35
zf-CCCH
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
121564986
NCBI-ProteinID:
XP_045070344
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
SAKTISQAPRSKERATRTDKDDQRKDEPSREEDRGKKFSRRVNYSPPSSSPYSRDSRRGD
DRKRDDRTRKRNDYDRNPPRRDSYRDRYNRRRGRSYSRSRSRSKDRARDRDRDRDRSSRS
HSRSHSRSRERDAGKSKYEADRGDRGKEVGAGDGLLPIPTATTTFPVPTLSSTITVIAPQ
GNHSNTSVTDSWSDFHTEHSLDRPPPPPPFNRGPPPQQRKRCRDYDEKGFCMRGDICPFD
HGIDPVVVEDVNLPNMFQAPPPVPGVAQPPPSLPPPPGPPPLMTPAPVNLRPPVPLPGSL
PPGPPLQASGMDAPPNSVPTIVTTGIRSSIPQVPPPLFSPDQYDSDMYNPEAPSLTTHPD
LCRHRVNAQRPNLIGLTMGEDLPHRDRDKMPNSNRMRIVLESDSRKRSAVSNDRGMPPMK
PWSDKPNFNPQNLQGGFHNKNPPHHNQRAAFGSNTKLTVRQIPPELNNISKLNQHFSKFG
TIVNLQVTYGSDPEGALIQFGCHEEAKRAMQSPEAVLNNRFIRVHWHREDGTGPQQGTGP
QQGTGPQQGTGPQQGTGPQQGTGPQQGTGPQQGTGPQGQQHHQPHSLMQVQPPATSLKQS
VKDRLGPLPSDSSEPNQDSSVASQNAFKSNLSVKERLGFPSKPGSNPSGPAGKVFSTSTG
LTKTVYNMAALKAAQKTALFAGVTATEEAMKNKQEALRLQQEMRKKKQEILEKHIETQKL
LICKLEKNKAMKPEDKAVIMTTLGTLTKSITKLQQEIKGISNPSALRGPPKSKTQAQKEL
LDTELDLYKKIQSGEDAVQLKIRYTQLQLEAAKRGILAPGRGRGAHARGRGSLRSRGRGR
GCRGRGLPAHSTVDHRPRALEISGFTDADLQDLLPHFAQFGELEDCQIDDTSFLAVITYR
SRPEAEQAAVHGVRLNSSELRLSWHKPAVSLTSQEPDEQEADHDEFQEESLIDDALLQDD
DEEDDDNEPRPWRR
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
tcagcgaagaccatcagccaggcaccgcggtcaaaggagagggcgaccaggacggacaag
gacgaccagaggaaagatgagccaagtcgtgaggaggaccggggcaagaagttctccagg
agagtgaactacagtcccccgtccagctccccgtacagccgagacagcagacgaggggat
gaccgtaaaagggacgaccgtaccaggaagcgaaacgattacgaccgcaaccccccgaga
cgggactcgtaccgggaccgttacaaccgtaggcggggtcgtagctacagccgcagcagg
agcaggagcaaggaccgggccagggaccgggaccgggacagagacaggagcagcaggagt
cacagcaggagtcactccaggagcagagagcgggatgctgggaagtcaaagtatgaggcc
gaccgaggagaccgggggaaggaggttggagctggtgacggcctcctgccgatccccacg
gcaaccaccacgttccccgtgccgacgctcagcagcaccatcacggtgatcgcccctcaa
ggtaaccacagcaacacctctgtgacggacagctggtcggacttccacacggaacactca
ctagaccggccccctccgccaccacccttcaaccggggtccgccccctcagcaaaggaaa
cgttgccgtgactacgacgagaagggcttctgtatgcgtggggacatttgcccgttcgac
cacggtattgatccagtggtggtggaggacgttaatctgcccaacatgttccaagcccct
ccccctgtcccgggggtcgcccagccccccccaagcttaccgccccccccaggacctccc
cctctcatgaccccagcgcccgtcaacctccgcccccctgtgcccctgccaggcagcctg
ccgccaggcccccccctccaggcatcagggatggatgctcctcctaactccgttcccact
atcgtaaccacagggatacgatcctccatcccccaggtcccaccgcctctcttctcacca
gaccaatatgattctgacatgtataaccctgaagctcccagcctcaccacacatccagac
ctgtgtcgccacagggtcaacgcccaaagacccaacctcataggactgactatgggggag
gacctgcctcacagagaccgagataagatgcccaacagcaacagaatgaggatcgttctg
gagtccgactctaggaagagatcagctgtctcaaacgacagagggatgccccccatgaaa
ccctggtccgacaaacctaacttcaacccgcagaacctccagggtgggttccacaacaag
aaccctccccaccataaccagagggctgcgtttgggtccaacaccaagctgacggtccga
cagatcccaccggaactcaacaacatctccaagcttaaccaacacttcagcaagttcggg
acgatcgtcaacttacaggtgacctatggtagtgacccggagggtgccctgatccagttt
ggctgtcacgaggaggctaaacgggccatgcagagtcccgaggccgttctcaacaaccgc
tttattagggtccactggcaccgtgaggacgggacgggaccacaacaggggacgggacca
caacaggggacgggaccgcaacaggggacgggaccgcaacaggggacgggaccacagcag
gggacaggaccacagcaggggacgggaccacaacaggggacgggaccgcaggggcagcaa
caccatcaaccacactcactcatgcaggtgcagccgccagccactagtctgaaacagtca
gtcaaagaccgcctgggccctctgccttctgacagctcagagcccaaccaagactctagt
gttgcctctcagaatgccttcaaatctaacctatcggtgaaggagaggctgggcttcccc
tctaaaccaggaagtaaccctagtggaccggcaggaaaggtgttctccacctctacgggg
ctgactaagacagtttacaacatggctgctctgaaagcagctcagaagactgctctgttt
gctggggtcactgccacagaggaggctatgaagaacaaacaggaagccctgcggctccaa
caggaaatgaggaaaaagaagcaggaaatcctggagaagcacatcgagactcagaagctg
ttgatctgtaagctggagaagaacaaggccatgaagccagaggacaaggcagtgattatg
acaacgctggggaccctcaccaagagtattaccaaactacagcaggagatcaaagggatc
tctaacccttcagcactacgggggccacccaagagcaagactcaggctcagaaggagttg
ctggacacagaactggacctatataagaagatccagtcaggagaagacgctgttcaactg
aagatcagatacacacaactacagttagaggcagctaagagggggatcctggctccaggg
cggggcagaggtgcccatgctaggggccgtgggtccctgaggagcaggggtaggggtagg
gggtgccggggtaggggtctccctgcccactccacggtagaccacagacccagagccctg
gagatctctggctttaccgacgctgaccttcaggacctgctgccacacttcgctcaattt
ggagagttggaggactgtcagatagacgatacttcctttctggctgttatcacctacagg
agcagaccagaggctgaacaggcggcggtgcacggtgttcgtctgaacagcagcgagttg
cgtctgtcctggcacaagcctgccgtctccctgacctcccaggagcctgacgagcaggag
gcagatcatgacgagttccaggaagagtcgctgattgatgatgcgttgctacaggacgac
gatgaggaggatgatgacaacgagccccgcccctggcgcagatga
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integrated database retrieval system
