Coregonus clupeaformis (lake whitefish): 121565126
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Entry
121565126 CDS
T08357
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 8 isoform X1
KO
K08623
a disintegrin and metalloproteinase with thrombospondin motifs 8 [EC:3.4.24.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121565126
Peptidases and inhibitors [BR:
cclu01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121565126
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Gene cluster
GFIT
Motif
Pfam:
ADAMTS_spacer1
ADAMTS_CR_2
TSP1_ADAMTS
Reprolysin
TSP_1
Reprolysin_5
Reprolysin_3
TSP1_spondin
Pep_M12B_propep
ADAMTS_CR_3
TSP1_CCN
Reprolysin_2
Reprolysin_4
Peptidase_M10
Motif
Other DBs
NCBI-GeneID:
121565126
NCBI-ProteinID:
XP_041731930
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Position
5:22443764..22456051
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AA seq
955 aa
AA seq
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MCSKRCFVLLVLCVIDKSLSKLFESEEIVPVRINGRSSRRFSKRSEEQPRFRLSAFGRDF
TLNLSPDNSFLSPTLTIQRIKAKDIHTLRSASGAQGRYTSSDAETETDFHNLINKTEEME
RDLRSCFYSGTVDSNQDSVVAVSICYGILGSFVTDGDEYLIEPKVLGSGRRERSTEQLHF
IKRRSATEAPNNTQTVFDQLSEESRVKADKESFMHEEKDPERQLRGKRFVSAPRFIETLV
VADMSMTHFYGDEIKHYILTLVSVAAQLYKHPSIKNSVHMVVVKMVVVEDEEVGPSLSNN
GGVALRNFCAWQQQFNPASQRHPEHYDTALLFTREDICGHQSCDTLGVADVGTMCDPKRS
CSVIEDNGLQAAFTAAHELGHVLSMPHDDSKNCERMFGNLGGHHMMAPLFVHLNKTFPWS
PCSALYITEFFDNGHGDCLLDPPESILPLPSELPGTTYSLDHQCQQMFGEEFVHCPNTSD
SDVCSQLWCREEGKPHCTTKNGSLHWADGTTCATKRSCLHGACMADHEVMQPKVVEDGGW
GAWGPWQQCSRTCGGGVEFSYRECTDPVPQNGGKYCEGQRVQYQSCNTQACEDNDGKSFR
EEQCEKYNSFNYLDILGNMKQWIPKYTGVSPRDRCKLFCRAKGSSEFKVFEAKVVDGTTC
GPDTTSVCVQGQCVKAGCDQEIGSNKRLDKCGLCGGNGLSCRKITGSYNKAIYGYSDIVT
IPVGATNIDIKQRSHRNIKHDGNYLAIKQESGGYILNGNFSVSTVEQDIPVLGAVLKYSG
SSTTLERIQSFRQLREAVTIQLLATAGEESPPKVKYTFFIPKDVSFTKSKERKASLHMIQ
AFGVPQWRLGEWSECSKSCGSGWSRRNVECRDNAGFHSNTCDKDLKPTDIRPCADLPCPI
WQMGPWSSCSRTCGQGERRRSVVCIDYTGKTVESEMCDANKQPAPVSGECVYQEC
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcaaaacggtgtttcgttttactagtcctgtgcgtaatcgacaaatcactttcg
aaattgtttgaatccgaggaaattgtacctgtcaggataaatggaagaagcagccgtcgt
ttttcgaagcgaagtgaagaacagccgaggtttagactcagtgcctttggccgagatttc
actttgaatttaagcccggataacagtttcttatctcctacactgacaattcaacgcatc
aaagcaaaagatatccacactttacgcagcgcctcaggtgcccaagggagatacacttca
tctgatgctgaaactgaaactgactttcacaacttgataaacaagactgaggaaatggaa
agagatttgagaagctgtttttactcggggactgtggactccaaccaagattctgttgtt
gcggtcagtatctgttatggcatccttggatcgtttgttacagacggggatgagtattta
attgagcccaaagtgctcggctcagggagaagggagaggtccactgaacagttacatttt
atcaaaagaaggtcagccacagaagcaccaaataacactcaaactgtctttgatcaactg
agtgaggagagtcgtgtaaaagcagacaaggaaagttttatgcatgaggaaaaagatcct
gagagacaattacgagggaaacgctttgtatcagcaccacgatttattgaaacgctggtg
gttgcagacatgtcgatgacacatttctatggagatgagataaagcactatatccttacc
ttggtctctgtggctgcccagctttacaaacatcccagtatcaagaactctgtccacatg
gtggtggtgaaaatggtggtggtggaagacgaggaggttggaccgtcactctccaataac
ggaggagtcgctctgcggaatttctgtgcctggcaacagcagttcaacccggccagccag
aggcatcctgagcactatgacactgctctacttttcacccgagaggatatttgtggacat
cagagttgtgacaccctaggggttgctgatgtgggaaccatgtgtgatccaaaaaggagt
tgctctgtcattgaggacaatggacttcaagcagccttcactgctgcccatgaacttggc
catgtgctgagtatgccacacgacgactccaagaattgcgagaggatgtttgggaatcta
ggcggccatcacatgatggcccctctgttcgttcacctcaacaagactttcccctggtcc
ccttgcagtgctctctacatcacagagttctttgacaatggacacggggactgcctcttg
gatccaccggagagcatcttaccgttacccagtgaactcccaggcaccacatacagcctc
gaccaccagtgccagcagatgtttggggaggagtttgtgcactgccccaacacctctgac
agtgacgtctgcagccagctgtggtgcagggaggaaggaaagccccactgcactaccaaa
aacggcagcctccactgggcggatggcaccacatgcgccaccaaaaggagctgtctgcac
ggtgcatgcatggcagaccacgaggtcatgcagccaaaggtggttgaggatggcggctgg
ggcgcgtggggaccatggcaacagtgctccaggacatgtggagggggtgtggagttctcc
tacagggagtgcacagatcccgtgccccagaacggcggcaagtattgcgagggccagaga
gtccagtaccagtcctgcaacacccaggcgtgtgaggataatgatgggaagagttttaga
gaggagcagtgtgagaagtacaacagcttcaactatctggatattcttgggaacatgaag
caatggattccaaagtacactggtgtgtcgccccgggacaggtgtaaactcttctgccgg
gctaaaggcagcagtgaattcaaagtctttgaagccaaggttgtcgatggcaccacatgt
ggtcccgacactacgtctgtctgtgtacaaggccaatgtgtcaaggcgggctgtgaccaa
gagatcggctccaacaagaggcttgacaagtgtggcttgtgtggtgggaatggcctcagt
tgcaggaagatcactggttcatacaacaaagccatttacggatatagcgacattgtgacc
attcctgtcggggctaccaatattgacatcaaacagcgcagccatagaaacatcaaacac
gatggaaactacctggcgatcaagcaagagagcggtggctacatactgaatggtaacttc
tctgtgtccacagtggagcaggatatccctgttcttggggctgtgctgaagtacagtggc
tcgtccaccaccttggagagaatccagagcttcagacaactgagggaggctgtcaccatc
cagttgctggccactgctggggaggaatctccacccaaggtcaaatacacattctttatc
cccaaagatgtgtctttcactaaatccaaagagagaaaggcttcgttgcatatgatccag
gctttcggtgtgccccagtggcgtttgggcgaatggtcagagtgctccaagagttgcggc
tctgggtggtcccgaaggaacgtcgaatgcagagacaatgctggtttccattccaatacc
tgcgataaggacctgaaaccgaccgatatcagaccctgtgctgatctgccgtgccccatc
tggcaaatggggccttggtcgtcctgttcacgaacttgtggccagggggaacgccgacgc
agtgttgtctgtatagactacaccggcaagactgtcgagtcggagatgtgtgacgccaac
aagcaacctgcgccagtgtcgggagagtgtgtttaccaagagtgctag
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