Coregonus clupeaformis (lake whitefish): 121565159
Help
Entry
121565159 CDS
T08357
Name
(RefSeq) zinc finger and BTB domain-containing protein 44-like isoform X1
KO
K10515
zinc finger and BTB domain-containing protein 44
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121565159
04121 Ubiquitin system [BR:
cclu04121
]
121565159
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121565159
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121565159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_11
zf-C2HE
zf-C2H2_9
zf-C2H2_3rep
KLHL33-like_BTB_POZ
Motif
Other DBs
NCBI-GeneID:
121565159
NCBI-ProteinID:
XP_041731943
LinkDB
All DBs
Position
5:22469228..22480451
Genome browser
AA seq
622 aa
AA seq
DB search
MGVKTFTHSSPAHSQEMLEKLNALRNEGHLCDVTIRVQDKLFLAHKVVLACCSEFFRSKL
VGRPEEEDKFVLDLHHVTVSGFTPLLEYAYTSTLSINTENIIDVLAAASYMQMFAVASTC
SEFMKSSILWSAGNMGQEKPQESALGESTSSHCALTPLDSSLSPVSSDCSVMERNIPVCR
ESRRKRKSFIMMSPESPLKCTSQITSPQMPNPSPSSFSESATQPVDSSLAFPWTFPFGID
RRFHQDKQPKLPESPRRLEQAGPSDVSRRLSDFLTCESSIKAPLSLAGTEENVRVKVERL
SDEEVQDTSSQPVSASQSSLSDQQTVPCSEQVQEDLLISPQSSSIGSLDEGVTEGLPSMQ
STSNAGGHAEDDERLESLQYPYHLYISPSTRPGTNGPDRPFQCPTCGVRFTRIQNLKQHM
LIHSGIKPFQCDRCGKKFTRAYSLKMHRLKHEGKRCFRCQICSATFTSFGEYKHHMRVSR
HIIRKPRIYECKTCGAMFTNSGNLIVHLRSLNHEASELANYFQSSDFLMPDYLSQVQEEE
TLGQYELVEHGFEGNNSSVQMPVISQVSSTQNCESSTFPLDPLSLKDENVSEEPKTNGSS
SSPDGSEEENAHIKELASITIE
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcaaaacctttacccacagttcccccgcgcacagtcaagagatgctggaaaag
ctaaacgccctgcgcaacgagggccacctctgcgacgtcaccatccgggtccaggacaag
ttgtttctggcgcacaaggtggtgctggcctgctgcagcgagttcttccgctccaaacta
gtgggcaggcctgaggaggaggacaagtttgtgttggacttgcaccacgtcacggtgagc
ggcttcacccccctgctggagtacgcctacacctccaccctctccatcaacacagagaac
atcatcgacgttttagccgccgccagttacatgcagatgtttgccgtggcgagcacgtgc
tcggaattcatgaagtccagcatcctctggagcgccgggaacatggggcaggagaaaccg
caggagtcggctcttggcgagagcacttcctcccactgcgctttgaccccgttggacagc
agcctgtcgcctgtatcgtctgactgcagcgtgatggagaggaacatccctgtgtgtcgc
gagtcacgccgcaaacgtaagagctttatcatgatgtcgccagagagcccactcaaatgc
acctcacagatcacctcgccgcagatgcccaacccatcgccctcttccttctcggagagc
gccacccagcctgtggactcttccctggctttcccgtggacctttcccttcggtatcgac
cgtaggttccaccaggataagcagcccaagcttcccgagagcccacgtcgtctggaacag
gcagggccctcggacgtgagccgccggctgagtgatttcctcacctgtgaaagctccatt
aaggcaccgttgtcgctggccggcaccgaggagaacgtgcgtgtgaaggtggagaggcta
agtgacgaggaggtccaggacacgtcgtcgcagcccgtcagtgcatcccagagttccctg
agcgaccagcagacagtgccctgcagcgaacaggtccaggaggacctcctcatcagcccg
cagtcctcctccataggttcgttagatgagggagtcacagaagggttgccttcaatgcaa
agtacatccaatgctggaggtcatgctgaggatgatgaaagattagaaagcctccagtac
ccttaccacttatacataagcccttcaacccgccctggcactaacgggcctgacagacct
ttccagtgccccacgtgtggcgtccgattcacccgcatacagaacttaaagcaacatatg
ctcatccactctggcattaagcccttccagtgtgatcgctgtgggaaaaagttcacacgg
gcctactccctaaagatgcaccggctgaagcacgaaggtaaacgctgtttccggtgccag
atttgtagtgccacattcacgtccttcggcgaatataagcaccacatgagggtctcccgc
cacataatccgcaagccccggatttacgagtgcaaaacgtgcggcgccatgtttaccaac
tctggcaatttaattgtacacctgcggagtctgaaccatgaggcatctgaactagcaaac
tacttccagagcagtgatttcctcatgcccgactacctgagccaagtgcaggaggaggag
actctcgggcagtacgagctggtggagcacggcttcgaaggcaacaactcgtctgtccag
atgccggtcatctcccaggtctcctccacccagaattgcgaaagcagcaccttccccctg
gaccctttatccctgaaggacgaaaacgtgtcagaggagccaaagacaaacggcagtagc
agctccccggacggctcggaggaggagaacgcccacatcaaagaactggcttctattacg
attgagtga
DBGET
integrated database retrieval system
