KEGG   Coregonus clupeaformis (lake whitefish): 121565308
Entry
121565308         CDS       T08357                                 
Symbol
zranb3
Name
(RefSeq) DNA annealing helicase and endonuclease ZRANB3
  KO
K25861  DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cclu03032]
    121565308 (zranb3)
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121565308 (zranb3)
DNA replication proteins [BR:cclu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    121565308 (zranb3)
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    121565308 (zranb3)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII HNH HNH_5 DUF2116 DEAD Flavi_DEAD nSTAND3
Other DBs
NCBI-GeneID: 121565308
NCBI-ProteinID: XP_045065231
LinkDB
Position
30:complement(49783051..49838985)
AA seq 1352 aa
MSKSRRAMSEDQDMDCNPHNSHVDRRWDSQLSVLPDKLQQRLMPFQKEGVKFALSKNGRC
MIADEMGLGKTVQAISVAYAYRQEWPLLIVVPSSLKYPWVEEMERWIPELNPGDIHLVET
KSDTLGISSSKVTVLGYGLLTTDARPLVEALTRQRFNVVVVDESHYLKSRNAARTKILVP
LIQNAKRAILLTGTPALGRPEELFMQIDALYPRMFGTWSDYAKQYCNAHYRFFGNRRQWD
CRGASHLEELHQRLSEIMIRRLKAQVLPQLPPKIRQRIPFDLPKDAAKEASSSLEEWEHL
MRTMGSGVSATDNPFTEVMGLVTRMYKQTAIAKAGAVKDYIKMLLETEKLKFLVFAHHLT
MLQACTEAVIEAKASYIRIDGSVPSSERIHLVHQFQNDPETRVAVLSIQAAGQGLTFTAA
THVVFAELYWNPGHVKQAEDRAHRIGQTASVHVHYLIAKGTFDTVMWGMLNRKETVTGST
LNGKKEYLKAEVGDKDKWDFLNFAEAWTPSGMTLAAGGQVDNDKDPVFFNHFEKDKQHDI
RSFFSPGMEKKRKRTEDEVCQSPVTPTEKEGSIDLDVENPENDKEKNSQDPPDLQDQDLD
FSPQVKRLRLPTPTLTPSATHSPRSRLGGKRTSLPGGHQQQPPGPSVYPPSVLCKAGLVL
CKAGLVLYKAGLVLCKAGLVLSLPELVLCKAGLVLCKAGLVLWLPELVLCKAGLVLCKAG
LMLCKAGLMLCKAGLVLCKAGLVLCKAGLVLCKAGLVLCKAGLVLCKAGLVLCKAGLVLC
KAGLVLCKAGLVLCKAGLMLCKAGLVLYKAGLVLYKAGLVLSPDSQSTGSHAVSPGSRPD
QSTPREHPWIILSGSDSEQEDTPCPGPASLGTTVPQTDGQQRDQEEERQTDGQQRDQEEE
RQTDGQQRDQEEERQTDGQQRDQEEERQTDGQQRDQEEERQTDSQQRDQEEERQTDSQQR
DQEEERLKGKQSPVENQSAPHDHTDAQTDSVSSPADDEDTMASLPLYPNMKFCASKNTDR
IYLYSKEDSPLHWNFIPLDIKLDSWEDLPEAFRRRENRTQILRFVQQWSTLTAMKQRLIR
RSGLLFCSPVLALDELTSTQRKHSSTKRYLTKEDVSQASLSKAQCDGGTVRMVNKESFFT
KRRSTSISLPNTSTAVPVKTSEVHPEPPEGPSEAEAGYLQAVDSEGRPLCLSCHKACGST
GGAWDTRFCSQKCQEEFQLRSSQAYMRVRVLQTEQGVCQSCGLQAHQLYLKVRDAPPTHR
KEMLENTWLAQLSLKQLNEMIRAPVEGQFWQVDHIRPVYSGGGQCSLDNLQTLCTICHRT
RTSQQAKDRSQKKKGLAASKVASDITRFFIKK
NT seq 4059 nt   +upstreamnt  +downstreamnt
atgtcaaagtcaagacgggccatgagtgaggaccaggatatggattgtaacccccataac
tctcatgttgacaggagatgggacagtcagttgtcagtcctcccagacaagctacaacag
agactgatgccattccaaaaggagggggtcaaattcgccctatcaaagaatggaaggtgt
atgatcgcagatgagatgggtctagggaagacggtgcaggctatctctgtggcatacgcc
tacagacaggagtggcctcttctcatcgtggtgccctcctctctaaagtacccctgggtg
gaggagatggagaggtggatccctgagctcaaccctggagatattcatctggtggagacc
aagagtgacacactgggcatcagtagcagtaaggtaacagtgttgggttacgggctgctc
accacagacgcacgccccctagtggaggctctgaccagacagaggtttaatgtggtggtg
gtggatgaatcccactacctcaagtccaggaacgcagccaggaccaagatactggtacca
ctcatccagaacgccaagcgggccatcctactaacgggcaccccggccctgggacgacca
gaggagctctttatgcagatagatgccctctatcctaggatgtttggaacgtggagtgac
tacgccaaacaatactgtaacgctcactacaggttctttgggaacaggagacaatgggac
tgtcgtggtgcctctcatctggaggagctccaccagcgtctcagtgagatcatgatccgg
aggctgaaggcccaggtcctcccccagctaccccccaaaatacgccagcgcatccccttc
gacctgcccaaagacgctgccaaggaggcgagcagcagcttggaggagtgggagcacctg
atgaggacgatgggatcgggggtctctgccacggacaacccctttactgaagtcatgggg
cttgtgacacgcatgtacaaacagactgccatcgctaaggccggagcagtgaaagactac
ataaagatgctgctggagactgagaagttaaagttcctggtgttcgctcatcacctgacc
atgctgcaggcctgtaccgaggctgtcatcgaagccaaggccagttacatccgtatcgat
ggcagtgttccgtcctcagaacgtatccacctggttcaccagttccagaatgaccctgag
acccgtgtggccgtcctcagcatacaggctgctgggcagggcctgacgttcacagcagcc
actcacgtggtgtttgctgagctgtactggaaccctggccatgtgaagcaggctgaggac
cgggcgcaccgcatcggacagaccgcctccgtccacgtgcactacctcatcgccaaggga
accttcgacaccgtcatgtggggcatgctaaacaggaaggaaacggtaacaggcagtact
ctgaatggtaagaaggagtacttaaaggcggaggtgggggataaggacaaatgggacttc
ctgaacttcgcagaggcgtggacgccaagcgggatgaccctggcagcaggaggacaggtt
gacaatgacaaagaccctgtattctttaaccattttgagaaggacaaacagcacgacatc
cgttccttcttctctccgggtatggagaagaagaggaagagaacagaggatgaggtttgc
caatcccccgttacccccacagagaaggagggttctatagacttggatgtggagaaccca
gagaacgacaaggagaaaaactcccaagatccccctgacctccaggaccaggacctagac
ttctctccccaggtgaagaggctgcggctgcccacccccaccctcacccccagcgctacc
cacagccccaggtctcgtcttggagggaagaggacgtccctcccgggggggcaccagcag
cagccccctggcccctctgtttaccccccgtcggtgctctgtaaggctggcttggtgctc
tgtaaggctgggttagtgctctataaggctgggttggtgctctgtaaggctgggttggtg
ctctcgctgcctgagttggtgctctgtaaggctgggttggtgctctgtaaggctgggttg
gtgctctggctgcctgagttggtgctctgtaaggctgggttggtgctctgcaaggctggg
ttgatgctctgtaaggctgggttgatgctctgcaaggctgggttggtgctctgcaaggct
gggttggtgctctgtaaggctgggttggtgctctgtaaggctgggttggtgctctgtaag
gctgggttggtgctctgtaaggctgggttggtgctctgcaaggctgggttggtgctctgc
aaggctgggttggtgctctgcaaggctgggttggtgctctgcaaggctgggttgatgctc
tgtaaggctgggttggtgctctataaggctgggttggtgctctataaggctgggttggtg
ctctctccagactcacagtctacaggttcacatgctgtgtccccaggctccaggcctgat
cagtccacccctagagaacacccctggatcatcctctctgggtcagacagcgagcaggag
gacaccccctgtcctggtcctgcctctctcggtacaactgtaccacagacagacggtcaa
cagagagatcaggaggaggagagacagacagacggtcaacagagagatcaggaggaggag
agacagacagacggtcaacagagagatcaggaggaggagagacagacagacggtcaacag
agagatcaggaggaggagagacagacagacggtcaacagagagatcaggaggaggagaga
cagacagacagtcaacagagagatcaggaggaggagagacagacagacagtcaacagaga
gatcaggaggaggagaggctcaaaggcaaacaatcaccagtagagaaccagtcagcccct
catgatcacactgatgcccagacagacagtgtatctagtcctgctgatgatgaggacact
atggccagtctccccctgtaccccaacatgaagttctgcgccagcaagaacactgaccgt
atctatctttactccaaggaggacagtccactgcactggaacttcattcctctggacatt
aaactggacagctgggaggacctacctgaagccttcagacgcagagagaacaggacacag
atcttgaggtttgtgcagcagtggagcactctgacagccatgaagcagagattgatccgc
cgcagtggtctcctgttctgcagcccagtcctggccctggacgagctgaccagcacccag
cgcaaacacagcagcaccaagaggtacctaaccaaagaagacgtgtcccaggcctctctc
agtaaggcccagtgtgatggaggaactgtccgcatggtcaacaaggagagcttcttcacc
aagaggagatctacctctatctcgctacccaacacctctaccgccgtcccagtgaagaca
tctgaggtgcacccagagcctcctgagggtccgtcagaggctgaagctgggtacctacag
gcggtggacagtgaaggtcggcccctgtgcctgtcttgccataaggcctgtgggtccacc
ggaggggcctgggacacccgcttctgtagccaaaagtgtcaagaggagttccagctgcgc
tccagccaggcatatatgcgtgtccgggtactgcagacggagcagggggtgtgtcagagc
tgcggcctgcaagcccaccagctgtacctgaaggtccgcgacgccccgcccacacacagg
aaggagatgctagagaacacctggctggcccagctgtcactcaaacagctgaatgagatg
atccgtgcccccgtggagggtcagttctggcaagtggaccacatccgacccgtctacagt
ggaggaggacagtgttccctggacaacttacaaacactctgcaccatctgccacagaact
aggacaagtcagcaagccaaagacagaagccagaagaagaaaggactggcagcctccaag
gtggcttcagacatcactcgcttcttcataaagaaatga

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