Coregonus clupeaformis (lake whitefish): 121565398
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Entry
121565398 CDS
T08357
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121565398
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
121565398
Condensin II
121565398
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GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
APG6_N
CCDC113_CCDC96_CC
HMMR_N
COG6_N
HIP1_clath_bdg
BRE1
Motif
Other DBs
NCBI-GeneID:
121565398
NCBI-ProteinID:
XP_041732018
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All DBs
Position
5:23538839..23561223
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AA seq
1297 aa
AA seq
DB search
MPAKTSKSSTASKPRGKGSQPRDDSEDELDVTLPPKEANSNGQESPPTTDPAAGEGADAV
DNRSLEEILGSIPPPPPPAMTNEPGAPRLMITHIVNQNFKSYAGEQILGPFHKRFSCIIG
PNGSGKSNVIDSMLFVFGYRAKKIRSKKLSVLIHSSDQHNDVQSCTVEVHFQKIIDKEGD
DYEVIPNSKFYVSRTASKDNSSSYHINGKKATFKDVGTLLRSHGIDLDHNRFLILQGEVE
QIAMMKPKGQTEHDEGMLEYLEDIIGSCRLKQPIHTLSRRVELLNEQRGEKLNRVKMVEK
EKTALEGEKNTAVEFLTLENDIFKQKSQLCQYYVHDLQKRVANKEEEKQRIQDDTKELTE
KNNNIAEKMEKKNQDLKNVEKKQGKLTKYIEGQKEKFTQLDLQDVEVREKLKHTKSKIKK
LQKQLEKDKEKLEEVRNVPASSEKTISEASARREELEKQKGEEEEKLKEVMESLKEETSG
LQQEKETKEKELMELSKAVNETRSRQDVAQSELDIYLSRHNTALTQLNMAKQSLQTTSDT
LRDRRAAIEELQVKIPQCEQELKKDEAELEQLLQADGQARELVKDMRQKVEEAKSSLSSN
RSRGKVLDALMQQKRSGKIPGILGRLGDLGAIDEKYDIAISSSCGSLDNILVDSIDTAQK
CVNFLKAQNIGVATFIGLDKMKVWENKMGPISTPENIPRLFDMVRVQDESMKPAFYFALR
DTLVAKDLEQATRLAFQKDKRWRVVTMQGQIIEMAGTMTGGGGRVMRGRMGTSIGTEVTQ
QELDRMESKLNEKVVQLQVCQERKLQLEEKVQRLRQQLRDMKNTLEKYTNSMQSLAEQEA
HLKPQIKELEANVLAAAPDKNKQKQLEKSLKDFQKDFEAASSKAGKVEAEVKRLHTLIVD
INSHKLKAQQDKLDKVNKELDDCSSAITKAQVAIKTAGRNLKKCEEGVSRLEGELDENEK
SLGELMEHLKRLEEEAGEIMKACQEAEAALPEVQEQHQGVVREIKALQEQEHALQEESLS
VRLRVEQIDTSITEHTNKIKHWQREASKLSLHAIEDKPAEALPVLTLADLAAIKGPDVIT
NQISLLEARCAQMKPNLGAIAEYKKKEELYLKRVAELDEITTERDNFKRGCEDLRKQRLN
EFMAGFNIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSG
GEKTLSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRN
NMFEIADRLIGIYKTHNTTKSVGINPKTIVFKEPISV
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgccagccaaaacgtcgaaaagttcaactgcttccaagccaagagggaaagggtcgcag
cctcgggatgactccgaagacgagttggacgtaacgttaccccctaaagaagcgaactcc
aatggccaggagtcaccgccgacaactgatccggctgctggggagggtgccgatgctgtt
gataatcgaagtttggaggagattcttggtagcatccctccacccccgccgccagcaatg
accaatgaaccaggcgctcctcgcttgatgattacacatatagttaatcagaacttcaaa
tcctatgctggcgagcagattctgggccctttccacaagcgcttttcctgtatcattggt
ccaaatggcagtgggaagtccaacgtgatagattcaatgctctttgtgttcggctatagg
gcaaaaaaaatcagatcaaaaaaactctctgtgttgattcacagctctgaccagcacaat
gatgtgcagagctgcactgtggaagtgcattttcagaaaatcattgacaaggaaggagat
gactacgaagtcatccccaacagcaagttctatgtttccagaactgccagcaaagacaat
tcctcgtcctaccacatcaatggcaagaaggccactttcaaagatgtgggaactctgctg
cgtagccatggcattgatctggaccacaacagatttctgattttacagggtgaggtggag
cagatagccatgatgaagcccaaggggcagacggagcatgatgagggcatgctggaatac
ctggaggacatcattggctcctgccgcctgaagcagcccatccacaccctgagccgccgt
gtggagctcctcaacgaacagaggggagagaagctaaacagggtcaaaatggtggagaag
gagaagactgctctggagggagagaagaacacagccgtagagttcctcactctggagaat
gatatcttcaaacaaaagagccagctctgccagtactatgtccatgatctccagaagaga
gtggcaaacaaagaagaggagaagcagaggatccaagacgacaccaaagagctcacagag
aaaaacaacaacatcgctgagaaaatggagaagaagaaccaagacctgaaaaacgtggag
aagaaacaaggcaagctgaccaagtacattgagggccagaaggagaagtttacccagctg
gacctgcaggatgtggaggtccgagagaaactgaagcacaccaagagtaagatcaagaaa
ctacagaaacaactggagaaggacaaggagaagctggaggaggtgcgtaacgtgccggcc
agcagtgaaaagaccatctctgaggcgtccgctcgcagggaggagttggagaaacagaag
ggggaggaggaggagaaactgaaggaagtgatggagagtctgaaggaggagaccagcggt
ctgcagcaggagaaggagactaaggagaaggagctgatggagctgagtaaggccgtgaac
gagacccgctcccgtcaggacgtggcccagtctgagctggacatctacctgagtcgccac
aacaccgctctgacccagctgaacatggccaagcagtccctgcagaccacctccgacacg
ctgagagaccgccgcgccgccatcgaagagctgcaggtcaaaataccccagtgtgagcag
gagctcaagaaggatgaggcggagctggagcagctgctgcaagcagacggtcaggccagg
gagctggtgaaggacatgaggcagaaggtggaggaggccaagagctccctgtcctctaac
cgcagccgggggaaggtgctggacgccctcatgcagcagaagaggagcggcaagatcccc
ggcatcctgggacgactgggtgaccttggggccattgatgagaagtatgacatcgccatc
tcgtccagctgtggctctctggacaacatcctggtggacagcatcgacacagcccagaaa
tgtgtcaacttcctcaaggcccagaatatcggtgtggccacctttatcggcctggacaag
atgaaggtgtgggagaataagatggggcccatctccaccccagagaacatcccccgtctg
tttgacatggtgcgggtgcaggacgagagtatgaagccagccttctactttgccctgagg
gacaccctggtggccaaggatctggagcaggcaacacgcctcgccttccagaaggacaag
cgctggagggtagtcaccatgcagggacagatcatagagatggctggcaccatgactgga
ggcggagggagagtgatgcggggtaggatgggcacctccatcggcactgaggtcacccag
caggagctggaccgtatggagagcaagctgaatgagaaggtggtgcagctgcaggtctgc
caggagaggaagctgcagcttgaggagaaagtccagagactcagacagcagctcagagac
atgaagaacaccctggagaaatacaccaacagcatgcagagcttggcagagcaggaggct
cacctgaagcctcagattaaagagctggaggccaatgtcctggctgctgctcccgacaag
aacaaacagaaacagttggagaagagcctgaaggacttccagaaagactttgaggcagcc
tccagtaaggcagggaaggtggaggctgaggtgaagaggctccacaccctcatcgtggac
atcaacagccacaagctgaaggcccagcaggacaaactggacaaggtcaacaaggagctg
gacgactgctcctcagccatcaccaaggcccaggtggccatcaagaccgcagggcgtaac
ctgaagaagtgtgaagagggtgtaagtcgcctggagggagagctggatgagaatgagaag
agcctaggagagctgatggagcatctgaagaggctagaggaggaggctggggagatcatg
aaggcctgccaggaggctgaggcggcactgccggaggtacaggagcagcaccagggggtg
gtgagggagatcaaggccctgcaggagcaggagcacgctctgcaggaggagtctctcagc
gtacgcctccgggtggagcagatagacacctccatcaccgaacacaccaacaagatcaaa
cactggcagagagaggcctctaagctctcccttcatgccattgaggacaaaccagcggag
gcgctgcccgtgctgacccttgctgacctggcggccatcaaggggcctgacgtcatcacc
aaccaaatctccctgctggaggcccgctgtgcacagatgaagcccaacctgggagccatc
gcagagtacaagaagaaggaggaactgtacctaaagcgtgtggctgagctggatgagatc
accacagagcgagacaacttcaagcgcggctgtgaggacctgcgcaaacagaggctcaac
gagttcatggctggcttcaacatcatcaccaacaagctgaaggagaactaccagatgctg
acactagggggtgacgctgagctggagctagtcgacagcctggaccccttctctgagggc
atcatgttcagtgtgcgtccccctaagaagagctggaagaaaatcttcaacctgtctgga
ggagaaaagaccctgagctctctggccctggtatttgctctgcaccacttcaagcccacg
cctctctacttcatggatgagattgatgcagccctggactttaagaatgtctccatcgtg
gcctgttacatttatgagcaaaccaagaacgctcagttcatcataatctccctgaggaac
aacatgtttgagattgctgaccgtctgatcggcatctacaaaacccacaacaccaccaaa
agcgtgggaatcaaccctaaaaccattgtcttcaaagagccaatctcagtttag
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