KEGG   Coregonus clupeaformis (lake whitefish): 121565488
Entry
121565488         CDS       T08357                                 
Name
(RefSeq) inner ear-specific collagen-like
  KO
K24214  otolin-1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cclu04990]
    121565488
Domain-containing proteins not elsewhere classified [BR:cclu04990]
 C1q domain-containing proteins
  Adiponectin / short collagen group proteins
   121565488
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 121565488
NCBI-ProteinID: XP_045071826
LinkDB
Position
5:23681561..23689311
AA seq 487 aa
MLSYHSALLAVAVMSFTVTSVSTKTTQRPKYQYTKKPIPYREQPQITMQPLTTIIPKTLK
SVEKSDPMYPYPLVTTETTTYPSDAYQDYYTETTGPPGVGHENYTLDYNECYFNFCECCP
PERGPRGPKGDRGLPGSPGEEGERGPRGFPGLACSNGTTGPKGDRGVKGDQGYRGMAGTP
GIPGKPGERGGFGFKGEKGDSGPPGVKGDRGEKGESQIGTKGERGTPGMEGPTGPTGLAG
VQNLKGDKGDKGECGTFGERGLKGDRGDPGPPGIQGQVGLPGVDGMHGSPGVAGDQGDPG
PPGAQGEPGVQGLPGHQGGRGMFGPKGDRGTPGMRGDRGPRGIRGAKGNGVIQKRSAFSV
GLTPSKSFPPSGFPVRFDKVFYNGENHYNASSSSFTCAHGGVYVFSYHITVRNKPLRAAL
VVNGVRKVRTRDSLYGQDIDQASSMVLLQLAAGDQVWLETLRDWNGVYASSEDDSTFSGF
LLYTDKP
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgctctcctatcactctgccctcttggcagtggcagtgatgtcattcacagtgaccagt
gtatcgacgaagaccactcagcggccaaagtaccaatacaccaagaagcccataccttac
cgcgagcagccccagattaccatgcagcccctaaccaccatcatccctaaaacactgaaa
tcagtggagaaatcagatcccatgtacccctacccactggttaccacagagaccacaacc
taccccagtgatgcctaccaggattactatactgaaaccacagggccccctggtgttggg
catgaaaattacaccctggattataatgagtgctacttcaatttctgtgagtgctgtcca
ccagagaggggccctcgagggccaaaaggggacagaggactaccaggttcacctggagaa
gagggggagcgaggacccagaggctttcctggacttgcttgttcaaatggaactacgggg
ccaaaaggagacagaggagttaaaggtgaccaaggataccgtggaatggcaggaactcca
ggtatcccagggaagccaggagagagaggtggatttggcttcaaaggtgaaaaaggtgac
agcgggccccctggggtcaaaggtgatcggggggagaagggtgaaagccaaattgggact
aagggtgagagagggacacctggaatggaaggcccaacaggacccacagggctggctggg
gtgcaaaacctgaagggggacaagggggacaaaggggagtgtgggacatttggggagaga
ggactgaagggcgatagaggggaccctgggcctccaggtattcagggccaggtgggcctt
cctggggtggatggcatgcatggctcccctggtgtggcaggtgaccagggggatccagga
cctccaggggctcaaggtgagccaggggtgcaagggctgcctggacaccagggagggagg
gggatgtttgggccaaagggtgacagaggcacccccggaatgagaggggacaggggccct
cggggtatcagaggggcgaagggtaacggggtgattcagaaacgctcagccttcagtgtg
ggcctcacccccagcaagtccttccctccatcgggcttccccgtccgctttgacaaggtc
ttctacaacggagagaaccactacaacgcctcctccagtagcttcacctgtgcccacggg
ggggtctacgtgttctcctaccacatcaccgtgcggaacaagcccctgcgcgccgccctg
gtagtcaacggagtgaggaaggtgcggacgcgggactcgctgtacggccaggacatcgac
caggcgtccagcatggtgctgctgcagctggcggcgggggaccaggtatggctggagaca
ctgagggactggaacggagtctacgccagcagtgaggacgacagcaccttctctggcttc
ctgctctacactgacaagccctga

DBGET integrated database retrieval system