Entry |
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Name |
(RefSeq) inner ear-specific collagen-like
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KO |
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Organism |
cclu Coregonus clupeaformis (lake whitefish)
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Brite |
KEGG Orthology (KO) [BR:cclu00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:cclu04990]
121565488
Domain-containing proteins not elsewhere classified [BR:cclu04990]
C1q domain-containing proteins
Adiponectin / short collagen group proteins
121565488
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
5:23681561..23689311
|
AA seq |
487 aa
MLSYHSALLAVAVMSFTVTSVSTKTTQRPKYQYTKKPIPYREQPQITMQPLTTIIPKTLK
SVEKSDPMYPYPLVTTETTTYPSDAYQDYYTETTGPPGVGHENYTLDYNECYFNFCECCP
PERGPRGPKGDRGLPGSPGEEGERGPRGFPGLACSNGTTGPKGDRGVKGDQGYRGMAGTP
GIPGKPGERGGFGFKGEKGDSGPPGVKGDRGEKGESQIGTKGERGTPGMEGPTGPTGLAG
VQNLKGDKGDKGECGTFGERGLKGDRGDPGPPGIQGQVGLPGVDGMHGSPGVAGDQGDPG
PPGAQGEPGVQGLPGHQGGRGMFGPKGDRGTPGMRGDRGPRGIRGAKGNGVIQKRSAFSV
GLTPSKSFPPSGFPVRFDKVFYNGENHYNASSSSFTCAHGGVYVFSYHITVRNKPLRAAL
VVNGVRKVRTRDSLYGQDIDQASSMVLLQLAAGDQVWLETLRDWNGVYASSEDDSTFSGF
LLYTDKP |
NT seq |
1464 nt +upstreamnt +downstreamnt
atgctctcctatcactctgccctcttggcagtggcagtgatgtcattcacagtgaccagt
gtatcgacgaagaccactcagcggccaaagtaccaatacaccaagaagcccataccttac
cgcgagcagccccagattaccatgcagcccctaaccaccatcatccctaaaacactgaaa
tcagtggagaaatcagatcccatgtacccctacccactggttaccacagagaccacaacc
taccccagtgatgcctaccaggattactatactgaaaccacagggccccctggtgttggg
catgaaaattacaccctggattataatgagtgctacttcaatttctgtgagtgctgtcca
ccagagaggggccctcgagggccaaaaggggacagaggactaccaggttcacctggagaa
gagggggagcgaggacccagaggctttcctggacttgcttgttcaaatggaactacgggg
ccaaaaggagacagaggagttaaaggtgaccaaggataccgtggaatggcaggaactcca
ggtatcccagggaagccaggagagagaggtggatttggcttcaaaggtgaaaaaggtgac
agcgggccccctggggtcaaaggtgatcggggggagaagggtgaaagccaaattgggact
aagggtgagagagggacacctggaatggaaggcccaacaggacccacagggctggctggg
gtgcaaaacctgaagggggacaagggggacaaaggggagtgtgggacatttggggagaga
ggactgaagggcgatagaggggaccctgggcctccaggtattcagggccaggtgggcctt
cctggggtggatggcatgcatggctcccctggtgtggcaggtgaccagggggatccagga
cctccaggggctcaaggtgagccaggggtgcaagggctgcctggacaccagggagggagg
gggatgtttgggccaaagggtgacagaggcacccccggaatgagaggggacaggggccct
cggggtatcagaggggcgaagggtaacggggtgattcagaaacgctcagccttcagtgtg
ggcctcacccccagcaagtccttccctccatcgggcttccccgtccgctttgacaaggtc
ttctacaacggagagaaccactacaacgcctcctccagtagcttcacctgtgcccacggg
ggggtctacgtgttctcctaccacatcaccgtgcggaacaagcccctgcgcgccgccctg
gtagtcaacggagtgaggaaggtgcggacgcgggactcgctgtacggccaggacatcgac
caggcgtccagcatggtgctgctgcagctggcggcgggggaccaggtatggctggagaca
ctgagggactggaacggagtctacgccagcagtgaggacgacagcaccttctctggcttc
ctgctctacactgacaagccctga |