Coregonus clupeaformis (lake whitefish): 121566204
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Entry
121566204 CDS
T08357
Name
(RefSeq) LIM domain kinase 1 isoform X1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121566204
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121566204
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121566204
Protein kinases [BR:
cclu01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
121566204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
PDZ_6
ABC1
Haspin_kinase
PDZ_2
APH
Motif
Other DBs
NCBI-GeneID:
121566204
NCBI-ProteinID:
XP_041732301
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MRLMLLCCDWKDERMGEEEAGRSLPVCAGCRQRIYDEQYLQALNTDWHTVCFRCCECSAS
LSHWYYEKEGRLFCKKDYWAKFGELCHGCNDPITTGLIMVAGEQKYHPECFTCLNCRAFI
GDGDTYALVERSKLYCGHCYYQTILTPVSLPDSPCARIPHTVTLVSIPASTDGRRGISVA
INQPLSPNGYGPEHTVRVSQVDSELISPDVKNSIHVGDRILEINGTPIRNVPLDEIDLLI
QETSRLLQLTIEHDPHDQGGSEGETVGGPLTTPLSDGPSPILPITQPPHPDINNLRSRLI
TRSYSTDKSPCSSNAVSPLSQRKDINRSESLRVVSNSRMHRIFRPSDLIHGEVLGKGCFG
QAIKVTHRETGEVMVMKELIRFDDETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNF
IAEYIKGGTLREIIKKMDTNYPWNQRVSFAKDIAAGMSYLHSMNIIHRDLNSDNCLVREN
NSVVVADFGLARLMVEDKIQDKSLLQKKPDRRKRYTVVGNPYWMAPEMIHGKSYDEKVDI
FSFGIMLCEIIGRVNADPDYLPRAHDFGLNVTGFLEHFCPPDCPPAFFPMAALCCDLDAE
KRPAFTKLQGWLENLKMNLEIRLPVVSELDTLHKAFWGNHTVPTMACTAMRSENGLPPHP
ETPE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgatgctgctctgttgtgactggaaggacgaacgtatgggagaggaggaagct
ggcagaagcttgcccgtgtgtgcgggatgcagacaacggatctatgatgaacagtatctc
caggcactcaacactgactggcacaccgtatgcttcagatgctgtgagtgtagtgcctcc
ctgtcccactggtactatgagaaggagggccggctcttctgcaagaaggattactgggcc
aagttcggagagctgtgccatggatgcaacgaccccatcaccaccggcctgatcatggtc
gcaggggaacagaagtaccatccagaatgcttcacctgtctgaactgcagagccttcatc
ggagacggagacacctacgcactggtggagaggtccaaactatactgtggccactgttac
taccagaccatcttgacgccggtgtcccttccagactcaccatgcgccaggatcccccac
acagtgaccctggtgtccatcccagcctccacagacgggcggagagggatctcagtcgcc
atcaaccagcctctcagccccaacggctatggcccagaacacactgtcagggtatcacag
gtggactctgagttgatcagtccagatgtgaagaactccatacatgtcggagaccggatc
ctggagatcaacggaacacccatcaggaatgttcctctcgatgagattgacctgctcatc
caggagaccagtcgtctgctccagctgaccatagaacacgacccccacgaccaggggggt
tcagagggtgagacagtgggcggacccctgaccacccccctgtctgacggtcccagcccc
atcctccccatcacccagcccccacacccagacatcaacaacctgcgctcacgcctgatc
acgcggagctacagtactgataagtctccgtgctccagtaatgcagtgtcccctctctct
cagaggaaggacattaaccgctccgagtcgctgcgagtcgtctccaacagtcgcatgcac
cggatcttccggccctcagacctcatccatggagaggtgctgggaaaaggctgctttgga
caggccatcaaggtgacccacagagagacaggggaggtgatggtgatgaaggagttgatt
cgtttcgatgacgagacacagaggacattcctaaaagaggtgaaggtgatgcgttgtctg
gagcatcccaacgtgctgaagttcatcggtgtcctctacaaagacaagagactcaacttc
atcgcagagtatatcaaaggaggaaccctgagggagatcatcaagaaaatggacaccaac
tacccatggaaccagagagtgagctttgctaaagacatcgctgcagggatgtcatatctg
cattccatgaacataatccaccgcgacctgaactcagacaactgtcttgtcagagagaat
aacagtgtagtggtggcagactttgggctggctcggctgatggtggaagacaagatccag
gacaagagtctcctgcagaagaagcctgaccgcaggaagagatacactgtagtgggcaac
ccctactggatggccccggagatgatccacgggaaaagctacgatgaaaaggtggacatc
ttttccttcggaatcatgctttgtgagatcatcggtagggtgaatgcagacccagactac
ttgcccagggcccatgactttgggctgaatgtgacaggcttcttagagcacttctgtcct
ccagactgccccccagccttcttccccatggctgccctctgctgtgacctggatgctgag
aaacgccccgccttcaccaagctgcaggggtggctagagaacctgaagatgaacttggag
atccgcttaccggtggtgtccgagctcgacacgctacacaaagcattctggggaaaccac
accgtccccaccatggcttgcaccgccatgcggtccgagaacggcctgcccccgcacccc
gagactccggagtag
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