Coregonus clupeaformis (lake whitefish): 121566387
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Entry
121566387 CDS
T08357
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121566387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121566387
03021 Transcription machinery [BR:
cclu03021
]
121566387
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
121566387
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
121566387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
121566387
NCBI-ProteinID:
XP_045072444
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MFVPLPVPFMFQRTAPDLNAWRLKSPLALRSDSDIRMSKPVAVENTGADSPMESTDSERN
GPDSNHQVQQMKISPFPLSPTLSSNKNKMEECGEMSPGPPPHHSHAPSQTPLPHTQLMLT
GSQLAGLTALLPAQQQLLLQQAQAQLLAAAVQQSVQQSNAAHAAHAAHAAAQANQQAQAA
AAANQQAQQQQAGQTGQQGQSQPQGQGQSTQQQTGQPVPVPPTHPQLTLSQPIQLTAQDI
QQLLQLQQLVLVPGHHLQSPQFLLPQHQGQQGLLSTPNLIQLPQQNNGSLLSAPTRLGLQ
AQRDKAMEGSGVMTSVSSVTSHPEEPSDLEELEVFARTFKQRRIKLGFTQGDVGMAMGKL
YGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSTDSTMPSPSSLSSSSMGFE
GLPGRRRKKRTSIETNVRVALERAFITQNQKPTSEEILCIADQLSMEKEVIRVWFCNRRQ
KEKRINPNSATPPLPGQPPQAPPSHKPPCYSPHMMSSQLSSQLSQAVTSLSTTMTTMSSF
SPLTPSGPTHSSLSSASSPVTPPPRSTASPAPHSHSTLSLNTGLWRMGKKNGDVSNYITD
FAANLRNTVMGVNTGNQALNQALLSNNPLATIQALAASGGQLPLSSLEGGSKVLLGGAGG
QGGGLQSSFFLNHPAFLHMGQNPGAGLVSAALAKASQPSPFPFTSSVSPTPCSPSPCSSP
ASSCNSDELAHSPSSLGGAKIE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttcatgtttcagagaactgcccctgacctcaacgcc
tggcgtctcaagtccccgttggctctacgttccgactccgatatcaggatgtcaaagcca
gtagcggttgagaacacaggggctgactctccaatggagagcacagattcagagcggaac
ggtcctgactcgaatcatcaggttcaacagatgaaaatcagtccctttcccctttctcca
accctcagcagcaacaagaataagatggaagagtgtggtgagatgtccccgggccctcct
ccacaccacagccacgccccctcacagacgcccctcccacacacacagctcatgctgacc
ggctcccaactggccgggttgaccgctctcttgccagctcagcagcagttgttactgcag
caggctcaggctcagcttctagctgcagctgtgcagcagtctgttcagcagtccaacgca
gctcacgcagctcacgcagcccacgcagccgcccaagccaatcagcaagctcaggcagcc
gcagcagccaatcaacaggcccagcagcagcaggcgggacagacagggcagcagggccaa
tcacagccccagggacagggacagagcacacagcaacagacaggtcaacctgtccctgtg
ccgcccactcatccccagctcaccctatctcagccaatccagctcaccgcccaggacatc
cagcagttgttgcagctgcagcagttggttctggtgccaggacatcacctgcagtctcct
cagttcctcctcccacagcaccaagggcagcaaggactgctatcaacaccaaatctgatt
cagctacctcagcaaaacaatgggagcctcctgtccgctcccaccaggctggggctccaa
gcacagagagacaaggcaatggagggcagtggggtcatgacctctgtgtcctctgtgacc
tctcaccccgaggagcccagtgacctggaggaactggaggtgttcgcccgcaccttcaaa
cagagacgcatcaaactgggctttacacagggtgacgtgggtatggccatggggaagcta
tatgggaatgatttcagccagactaccatctctcgcttcgaggccctcaacctgagcttt
aagaacatgtgcaaactcaaaccactactggagaagtggctcaatgatgcagagaccatg
tccacagacagtactatgcccagccccagctctctgtcctcttcctctatgggctttgag
ggcctgccgggccgacgcaggaagaagagaaccagcatcgagactaacgtccgcgtggcc
ctggagagagccttcatcacgcagaaccagaagcctacctcagaggagatcctgtgtatc
gcggaccagctcagcatggagaaggaggtgatccgcgtgtggttctgcaaccgccgccag
aaagagaagcgtatcaaccccaacagtgccacccctcccctgcctggccagccaccccaa
gccccaccatcacacaaacccccctgctacagcccacacatgatgtccagtcagctgtcc
agtcagctgtcccaggcagtgaccagcctcagcaccacaatgaccaccatgtcatcgttc
tcccctctgacccccagtggtcccacccactcatctctcagctccgcctcctctccagtg
actcctcctcctcgcagcacagccagcccagcccctcacagccacagcacactgagtctc
aacacaggcttatggcgtatgggtaaaaagaacggtgacgtgtctaactacatcaccgat
tttgctgcaaacttgaggaacactgtgatgggagtaaacacagggaaccaggctctgaac
caagctctcctcagcaacaaccctctggctactatacaagccctagcagccagtggtggc
cagctgcccctttccagtcttgaggggggcagtaaagtgttgctggggggtgcagggggg
cagggagggggtctccagtcctccttcttcctcaaccaccccgctttcctccacatgggc
cagaatcctggtgctggattggtcagtgctgccttagccaaagcctcccagccctccccc
ttccccttcaccagcagcgtaagccccaccccctgctccccctctccttgctccagcccc
gcctcttcctgcaactccgatgaattggcgcacagcccatcctcgctgggaggggctaag
attgagtga
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