Coregonus clupeaformis (lake whitefish): 121566391
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Entry
121566391 CDS
T08357
Name
(RefSeq) clustered mitochondria protein homolog isoform X1
KO
K03255
protein TIF31
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cclu03012
]
121566391
Translation factors [BR:
cclu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121566391
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
CLU_N
TPR_10
TPR_MalT
TPR_NPHP3
GSKIP_dom
Rad60-SLD
PGA28-like_dom
Motif
Other DBs
NCBI-GeneID:
121566391
NCBI-ProteinID:
XP_041732386
LinkDB
All DBs
Position
5:27115843..27136559
Genome browser
AA seq
1451 aa
AA seq
DB search
MVSKTDDIPVSVPNCNVNTVDLAGETPDRKETTKAPHKDPCACGHSADTAVMNGGGAHDH
SEEESKQNGGGDTDGGEDSNEQEVIVIQDTGFTVKIQAPGAEPFDLQVSPQEMVQEIHQV
LMDREDTCHRTCFSLQLDGNVLDNFAELKSIEGLQEGSLLKVVEEPYTVREARIHVRHIR
DLLKSLDPSDAYNGVDCNSLSFLSVFTDGDLGDSGKRKKGSDLEQIDCTPPEHILPGSKE
RPLLPLQPQNKDWKVIMMPMQCLKVLTMSGWNPPPGNRKMHGDLMYLYMVTVEERHISIT
ASTRGFYLNQSTTYTFNPKPANPSFLSHSLVELLSQISPAFKKNFTALQKKRVQRHPFER
IATPFQVYSWTAPQVDHTMDCVRAEDAYTSRLGYEEHIPGQTRDWNEELQTTRELARKNL
PERLLRERAIFKVHSDFAAAATRGSVAVIDGNVMAINPGEETRMQMFIWNNIFFSLGFDV
RDHYRELGGDAAAHAAPTNDLNGVRAYGAVDVEGLYTLGTVVVDYRGYRVTAQSIIPGIL
EREQEQSVIYGSIDFGKTVVSHGKYLELLEKTSRPLKVQRHDVLNEKDESVELCSSVECK
GIIGNDGRHYILDLLRTFPPDLNFLPVEGEELSPESVRQGFPRQHRHRLACLRQELIEAF
VEHRYLLFMKMAALQLMQQKANKESKMAALTENSSTEADIPALPSTETPDASAESSETST
ETLTDGKSDAVQTETTSTSDAPRAAATEATTTEAAPKAEPTTDSPSAATTTTNASQATPT
EDNVIPMVTTNGPLLPIATAIQNGECESPLEGKAEDSILGLAQAKELAESLAAEDGSGID
PKSREVVLNACKAVGSISNTSFDIRFNPDIFSPGVRFPEDSADDIQKQKQLLKDAAAFLM
SCQIPSLVKDCLDHSALPMDGATLTEALHQRGINIRYLGNVLEFVDKTPAKAQLEHFYRI
GISELITRCAKHIFKTYLQTMYSVSQGVELSALSAAVSHFLNCFLSSFPDAVAHLPADEL
VSRRKNRKRRNRVPGGGDNTAWASLTPSELWKNIVSEAQSYYHFTLYCENADQVVEKYGL
QKITLLREISIKAGIQILIKEYNFDSRHKPAFTEEDILNIFPVVKHVNPKASDAFHFFQS
GQAKVQQGYLKEGCELINEALNLFNNVYGAMHVEICACLRLLSRLNYIMGDHHEALSNQQ
KAVLMSERVLGIEHPNTIQEYMHLALYCFANGQLSTALKLLYRARYLMLMVCGEDHPEMA
LLDSNIGLVLHGVMEYDLSLRFLENALALNSKYHLPRSLKVALSHHLVARVYESKADFRS
ALQHEKEGYTIYKNQVGEAHEKTKESSEYLKYLTQQAVALQRTMNEIYKNGSNASIMPLK
FTAPSMASVLEQLNIINGIIFIPLSQKDLENLKAEVQRRQLLQESGKSMEELTVDSPLEL
EDKISMDVNVD
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcaagacggatgacatcccggtgtcagtacccaactgtaatgttaacacagtt
gatcttgcaggagagacgccagaccgcaaagagaccaccaaggcaccacacaaggaccct
tgtgcttgtgggcacagtgcagacacagcggtgatgaacgggggcggggcccacgatcat
tcggaggaggagtccaagcagaatgggggtggtgacacggacggtggggaggattctaac
gaacaggaagtgattgtgattcaggatacaggtttcaccgtgaagatccaggcacccggg
gcggagccttttgacctccaggtttcaccccaggagatggtgcaggagatccaccaggtg
ttgatggaccgtgaggacacctgtcatcgtacctgtttctccctgcagctggacggcaac
gtcctggataactttgctgagctcaaatccatcgagggcctgcaggagggctccctgctc
aaagtagtggaagagccctacacagtgcgcgaggcccgtatccatgtgcgtcatatcaga
gacctgctgaaaagcctggacccatctgatgcctacaacggagtggactgcaactctctc
tccttcctcagtgtcttcactgacggggacctgggagacagtggtaagcggaagaagggc
agtgatctggagcagatagactgtacccctccagaacacattctgcctggcagcaaagaa
cgccccctgctgcccctccagccacagaacaaggactggaaggtaataatgatgcccatg
cagtgcctgaaggtcctgactatgagtggctggaacccccctcctggcaacaggaagatg
catggtgatctcatgtacctgtatatggtgactgttgaggagagacacatcagtatcacc
gcctccacacgtggcttctacctcaaccagtcgaccacctacaccttcaaccccaagcca
gccaaccccagcttcctgagccactcgttggttgagctgttgagccagataagccctgcc
ttcaagaagaacttcactgccctgcagaagaaaagggtacagcgacatccgtttgagagg
atcgccacacccttccaggtgtacagttggaccgccccccaggtggaccacaccatggac
tgtgtcagagctgaggacgcttacacctcccgtctgggctacgaggaacacatacctgga
cagacgcgagactggaatgaggagttgcagacgaccagagagctggcccggaagaacctg
cctgaacgcctgctgagagagagggccatcttcaaggtccacagtgactttgcggctgct
gccactcgcggttccgtggcggtaatcgacggcaacgtgatggccatcaaccctggcgag
gagacgcgtatgcagatgtttatctggaacaacatcttcttctccctgggcttcgatgtc
cgcgaccactaccgtgagctgggcggggacgctgccgcgcacgctgctcctaccaacgac
ctcaacggtgtccgggcttacggggccgtagacgtggaggggctgtacaccctggggaca
gtggtggtggactatcgtggttaccgtgtcacggcccagtcgatcatccctggtattctg
gagagagagcaggagcagagcgttatctacgggtctatcgactttgggaagacagtagtg
tctcatgggaagtacctggagcttctggagaagaccagtcgaccactcaaggtccagagg
cacgatgtgctgaatgagaaggatgagtccgtggagttgtgttcctctgttgagtgtaag
ggcataatcggcaacgatggacgccactacatcctggaccttctgaggaccttcccccct
gacctgaacttcctgcctgtggaaggggaggagctttcccctgagagtgtgagacagggt
ttcccccgtcagcaccgccaccgtctggcctgcctccgacaggagctcatcgaggccttc
gtcgagcacagatacctcctcttcatgaagatggcagcactccagctgatgcagcagaaa
gccaacaaggagagcaaaatggccgccctgacagagaacagcagcaccgaggcagacatt
ccagccctaccctccacagagacccccgatgcctcagccgagtcctcagaaacttccaca
gaaaccctcactgatggcaagtcagacgcagtccagacagagaccacctccacctctgat
gcccctcgggcagcagcaacagaagccaccaccacagaagcagcccccaaggcagaacca
acaacagacagtccctctgctgcaacaacaaccactaatgcctcccaggcaacccctaca
gaggataatgtgattcccatggtgaccaccaatgggccgttgttgcccattgccacggcg
attcagaacggggagtgcgagagccctctggagggtaaggctgaggatagtatcctgggc
ttagcccaggccaaagagctggctgagtccttagccgcggaagacggatccggtatcgat
cctaaaagccgagaggtggtcctcaacgcctgcaaggccgtgggttccatcagcaacacc
tccttcgacatccgcttcaacccagacatcttctctccaggagtgcgtttccctgaggac
agtgcggatgacattcagaaacagaagcagctgttgaaggatgctgcagccttcctgatg
tcctgtcagatcccatctctggtgaaggactgtctggaccacagtgctctgcccatggat
ggagccacgctgaccgaggctctgcaccagaggggcatcaacatacgttacctaggcaat
gtcctggagtttgtggacaagaccccagccaaggcacagctggagcacttctatagaata
ggtatcagcgagttgatcaccagatgtgcgaaacatatcttcaagacatacctgcagact
atgtactccgtctcccagggtgtggagttgtcggccctctcagccgctgtcagccacttc
ctcaactgcttcctgtcctccttccccgatgccgtggcacacctgcctgccgacgagctc
gtgtcgcgccgcaaaaaccgtaaacgccgtaaccgagtcccggggggaggggacaacacg
gcgtgggccagcctgacacccagcgagctgtggaagaacatcgtctctgaggcccagagc
tactaccacttcaccctgtactgcgagaatgctgaccaggtagtggagaaatacggcctt
cagaagatcactctgctcagagaaatctccatcaaagctggcatccagatcctgataaag
gagtataactttgacagtcgccacaagcctgccttcacagaggaggacatccttaacatc
ttccctgtggtaaagcacgtcaaccccaaggcctccgatgccttccacttcttccagagt
ggacaggccaaggtccagcaaggttacctgaaggagggctgtgagttgatcaatgaggct
ttgaacctgttcaacaacgtgtacggggcaatgcatgtagagatctgtgcctgcctgcgt
ctgctgtctcgcctcaactacatcatgggagaccaccacgaggctctcagtaaccaacag
aaggctgtcttgatgagtgagagagtgctgggcatcgagcaccccaacactatccaggaa
tatatgcacttggctctgtactgctttgccaatggtcagctgtccactgccctgaagctg
ctgtaccgtgcccgctacctcatgctgatggtgtgtggggaggaccaccccgagatggcg
ctgctagacagtaacattggcctggtgctgcacggagtaatggagtacgacctgtctctg
aggttcctggagaacgccttggccctcaactccaaataccacttaccccgctccctcaaa
gtagccctcagtcatcatctggttgcgagggtttacgagagcaaggcagatttccgctct
gcgctccagcacgaaaaggagggctacaccatctacaaaaaccaggtgggtgaggcccac
gagaagactaaagagagctcagagtacctaaagtacctcacacagcaggctgtggctttg
cagagaaccatgaatgaaatctacaagaacggctccaatgccagcataatgccactcaag
ttcacagcacccagtatggccagtgttctggaacagctcaatatcatcaacggcatcatc
tttataccgctcagccaaaaggacttggagaacctgaaggcggaggtccagcggcggcag
ctgcttcaggagtcagggaaaagcatggaggagctcactgtggacagtccactagagctg
gaggacaaaatatccatggacgttaacgttgattaa
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integrated database retrieval system
