KEGG   Coregonus clupeaformis (lake whitefish): 121566543
Entry
121566543         CDS       T08357                                 
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
  KO
K10373  tropomyosin 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04260  Cardiac muscle contraction
cclu04261  Adrenergic signaling in cardiomyocytes
cclu04814  Motor proteins
cclu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    121566543
   04820 Cytoskeleton in muscle cells
    121566543
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    121566543
   04261 Adrenergic signaling in cardiomyocytes
    121566543
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cclu04812]
    121566543
   04147 Exosome [BR:cclu04147]
    121566543
Cytoskeleton proteins [BR:cclu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     121566543
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of microglial cells
   121566543
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ DUF745 Crescentin TMF_DNA_bd ATG16 PUMA_CC Lebercilin CENP-F_leu_zip DUF3450 MscS_porin DUF16 Laminin_I ERM_helical EzrA DUF1664 FPP SlyX Fez1 XhlA TMP_N
Other DBs
NCBI-GeneID: 121566543
NCBI-ProteinID: XP_045080967
LinkDB
Position
15:complement(18981760..18998017)
AA seq 284 aa
MDAIKKKMQMLKLDKENALDRAEGAEGDKKAAEDKSKQLEDDLVALQKKLKGTEDELDKY
SESLKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRASKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSEGKCSELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq 855 nt   +upstreamnt  +downstreamnt
atggacgccatcaagaagaagatgcagatgcttaagctagacaaggagaatgccttggac
agagctgagggagctgagggagacaaaaaggcagcggaggacaagagcaaacagcttgag
gatgacctggtagcgctgcagaagaagctgaagggaacagaggatgagttggacaagtac
tctgagtctcttaaggatgcccaggagaaacttgaactcgctgagaagaaagccacagat
gctgaggctgatgtagcttccctgaacagacgtatccagctggttgaggaggagttggat
cgtgctcaagagcgtctggccacagctctgacgaagctggaggaggctgagaaggctgct
gatgagagcgagagaggcatgaaggtaattgaaaacagggcatcgaaggatgaagagaag
atggagctacaggagatccagctgaaggaggccaagcacatcgctgaggaggctgacagg
aaatacgaggaggtcgcccgtaagctggtcatcattgagagtgatctggaacgtacagag
gagcgcgctgagctgtcagaaggcaaatgctctgagctagaggaagagttgaagacagtc
acaaacaacctgaagtctcttgaggctcaggcagagaagtactcacagaaggaggacaag
tacgaggaggagatcaaggttctcacagacaaactaaaggaggctgagacccgtgctgag
ttcgctgagaggtccgtggccaagcttgagaagaccattgatgatctggaggatgagttg
tatgcacagaaactgaagtacaaggccatcagcgaggaactggaccacgccctcaacgac
atgacctccatttaa

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