Coregonus clupeaformis (lake whitefish): 121566596
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Entry
121566596 CDS
T08357
Name
(RefSeq) vitronectin
KO
K06251
vitronectin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121566596
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121566596
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121566596
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121566596
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121566596
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121566596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
Motif
Other DBs
NCBI-GeneID:
121566596
NCBI-ProteinID:
XP_041732510
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Position
5:complement(26485792..26495864)
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AA seq
635 aa
AA seq
DB search
MRLGLILLLAGLATVFAAEESCIDRCENGFDSKKNCQCDTMCRYYKSCCSDYETACRMKT
RGDTFEFAEDDDGPFAPTTPASLTKPEDGESSSSGGQRRQTTRLRTPNTTPTPTTIATKA
SPEIETARGAARGPQRGQVPVVVPLPETAKATEVTSVPQVPSVQQKISVPQKATVTVIEA
ELVTTEAPVTTAEVETATEEVVTTTKAPVVDPDAEPCSSRPWDSLMQLKNGSVYAFRGEW
FFELDEKSVMPGYPKLIQDIWGIRGPIDAAFTRINCQGKTYMFKGNKYWRFDDGVLEEDY
PRDINVGFEKIPDDVDAAFAIAAPGHHAKEKVYFFKGDQYYQYEFKHQPSHEECIKMSAG
SPSALFTAYTDIYYNNWEELFNMLFRGIPNHHGGHRFINKDWIGIKAPVDAVMTGRLYIT
PRPLAPPLSPPLPPLWDRNDRRRQPWDQQWGQYGQQDQLNGQQNGQQYGQQWEQQWGRRR
NRRQSYWGAGTGMAMGQAFAEKGIDVGKGFAERGMDLGRKLAERGMAMEGMFGGWDMRRT
DARDEDRDRDRRRDDRDRRRDGFNYDSRYNIEERAYWEFVNKGQPVQSVYFFKGDKYYRV
DLKTKKVDPASPPYPRSIGKYWLGCPEKHLGAEKK
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcgggctgatcctcctgctagccgggctagctactgtgtttgctgcagaggag
tcatgcatagaccgttgtgagaacggcttcgactccaagaagaattgccagtgtgacacc
atgtgtcggtactacaagagttgctgctcagactacgagaccgcctgtcgtatgaaaaca
cgtggggacacctttgaatttgcagaggatgatgatggtccatttgcccctacaacgccc
gcctccctgaccaaacctgaagacggggaatccagctcgtcagggggccaacgtaggcaa
accacacgcctcagaacccccaacaccacccctactcctaccacaattgccacaaaggca
agcccagagatagagacagctcgaggcgcagctcgaggcccacagagaggccaagtccca
gtggtagtcccactcccggagacagctaaagccaccgaggtaacatcagtcccacaggta
ccctcagtccaacagaaaatctcagtcccccagaaagccacagtaacagtaatagaggca
gagctagtcacaacagaagctccagtcacaacagcggaagtggagacagccacagaggaa
gtggtgacgaccaccaaggcaccggtagtagacccagatgctgagccatgcagcagcagg
ccctgggactccctaatgcagctcaagaacggctctgtctacgccttcagaggggagtgg
ttctttgagctggatgagaagtctgtgatgcccggctaccccaaactgatccaggacatc
tggggtatcagaggacctatagatgctgccttcactcgaatcaactgccagggcaagaca
tacatgttcaagggtaacaagtactggcggtttgatgatggtgtgctggaggaggactat
cccagggatatcaacgtgggctttgagaagataccagacgacgtggacgcagccttcgcc
atagcagcccctggacaccacgccaaagagaaggtctacttcttcaaaggtgaccagtac
taccaatatgagttcaagcaccagccatcacatgaggagtgtatcaagatgtcagctggg
tctccctccgctctgttcacagcctacactgacatctactataacaactgggaggaactc
ttcaacatgctcttcagaggcatccccaaccaccatggtgggcatcggttcatcaacaag
gactggatcggcatcaaggccccagtggacgctgtcatgacaggcagactctacatcacc
cccaggccactggccccacccctgtccccaccgttaccccctctatgggaccgcaacgac
agaaggcgccagccatgggaccaacagtgggggcagtatggtcaacaggatcagttaaat
ggacagcaaaatgggcaacaatatggacagcagtgggaacagcagtggggccgccgcaga
aataggcgccagtcttactggggtgctgggacgggaatggctatggggcaggcgttcgca
gagaaggggattgatgtagggaaaggattcgctgagagggggatggatctcggtcgaaag
ctggcggagagggggatggctatggaggggatgtttggagggtgggacatgcgccggacg
gatgccagggatgaagacagagacagggataggaggagggatgaccgggacaggagaaga
gatggattcaactatgactccagatacaacattgaggaaagggcctactgggagtttgtc
aacaagggccagccagtgcagagcgtctacttcttcaagggagataaatactacagagtg
gatctgaaaaccaagaaagtggacccagccagccctccttaccccaggtccatcggcaag
tactggctgggctgccctgaaaaacacctgggggccgagaagaaatag
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