Coregonus clupeaformis (lake whitefish): 121566844
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Entry
121566844 CDS
T08357
Name
(RefSeq) rho guanine nucleotide exchange factor 26-like isoform X1
KO
K13744
Rho guanine nucleotide exchange factor 26
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu05100
Bacterial invasion of epithelial cells
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121566844
05100 Bacterial invasion of epithelial cells
121566844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121566844
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Macropinocytosis
Others
121566844
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121566844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
SH3_2
SOS1_NGEF_PH
RHG20_PH
PH
PH_BUD3_C
ECT2_PH
Motif
Other DBs
NCBI-GeneID:
121566844
NCBI-ProteinID:
XP_041732657
LinkDB
All DBs
Position
5:30664223..30722273
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AA seq
922 aa
AA seq
DB search
MEGGNEVDLSNNNITPLWKRRSANHTGPSKPKARPLSYQIDGVHMTDFPVEDNKCSFTLS
QPTERLVATPGGGTVILKHVLNQPTRKTRVVRSISIGHLSKGRFSLSKIKSEDDKSPSLN
SKAYHGGSVGNIGNGEKVWSDKRPQDAQNRLSSPFTLTAHRDQIVFGTSPSPPDPASSKH
PSPHATPNNNNHNHQHHNQTSPSSYHPLNPSPSTPSLHTPTPSHSSTSSIHSLSSLTSTP
SDPPTPCSPSPADMSAPSPSPTPSLSPPPSIVLSTHSAAALKMGTQQLIPKGLASLSKVS
PAGVQSQGLGVSLGLDPTKRALRALSMVETGTFFSTGGGTGGKGTDQDESPATLKRGLRS
TSYRKAVVSGVEMETPSEDLKTHRLSQPTLKGLQEVKERPTSPGKKNKSPDKKPGLITQR
TFDSEEEVLYQNYQEKALHNDSDEDQSREAKPDDRIVLQYRPIRTSWSQLSVVKKSGVSD
KLSQEELKRQEAIFELISSEHSYLHSLEILIRMFKNSAELSGTMTKTEHHHLFSNITDVC
EASKKFFKELEDKHQQNIVIDDISDIVFRHAQSNFDPYITYCSNEVYQQRTLQRLVSSKN
PVFKEALTRIEAHPDCRNLPMISFLILPMQRVTRLPLLMDVICQKAPKDSAQYETCKQAL
QSVSKVVRKCNEGARTMERTEMMYTINSQLEFKIKPFPLVSSSRWMVKRGELIAFVEENG
IFSKRTSRQQVYFFLFNDVLILTRKKSEDSYAVIDYALRDHIWVGPCQAEDVNLSPVRST
AGMLTSRQPGASHIFRLRFRSNHSGDKVPMVLGVELMNERARWISALGQSSNDKKNQDRT
NAMQVEVTRTYTAKQPDELSLQVADVVLVSQTVEDGWYEGERLRDGERGWFLSECAEPIT
CQATIERNMQRMDRLQGLETNV
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgggaacgaggtagatctgtccaacaataacatcacccctctgtggaagcgg
cgctcagccaaccacactggccccagcaagccaaaggcccggcccctcagctaccagata
gacggagtccacatgactgacttccccgtagaggacaacaagtgcagctttacactgagc
cagcctacagagagactggtggctacgccgggaggagggacggtcattctgaagcacgtt
ctcaaccaacccaccaggaaaacacgggtggtcagaagtataagcattggacatctgtcc
aaaggacgtttctctctatccaagatcaaatcggaggatgataaatcgccgtcattgaac
agtaaggcgtaccacggtgggagtgttggtaatattggtaatggggagaaggtgtggtcg
gacaagcggccgcaggacgcccagaatcgactctccagcccgttcaccctcaccgctcac
cgggaccagatagtgtttgggacgagcccttcaccgccggaccctgcctcctccaaacac
ccctctccccatgccacccccaataacaacaaccataaccaccaacaccataaccagacc
tccccttcttcctaccaccccttaaaccccagcccctccacccctagtctccacacccct
accccatcccacagctccacctccagtatccactccctctcctccctcacctctacccct
tctgatccccccacaccctgcagcccctcccctgctgacatgtctgccccctctccttcc
cccactccctccctctctcctcctccctccattgtcctcagcacccacagtgccgctgcc
ctgaagatgggcacccagcagctgatacccaaaggcctggcgtccctgagcaaggtctct
cctgctggggtacagagccagggcctgggggtttcgctgggcctggatcctaccaagcgg
gccctgcgagccctcagcatggtggagactggaaccttcttctccacgggtggagggacc
gggggaaaggggacagaccaggatgagagccctgcgactctgaagagagggttgaggtct
acctcgtacaggaaagcagtggtgagtggcgtggaaatggaaacaccatctgaagacctc
aagacccatcgtctgtcccaacctacactcaaaggactacaggaggtcaaggagagacct
accagccctgggaagaagaacaagagtcctgataagaagccaggactgatcacacagagg
acatttgacagtgaagaggaggtactgtatcagaactaccaggagaaagctcttcacaat
gactctgatgaggaccagtccagagaggccaaacctgacgaccgcatcgtgttgcagtac
agacccatacgcacctcctggagccaactcagtgtggtaaagaagagtggagtttctgat
aagctcagccaagaggagcttaaaagacaagaggctatatttgagttgatatcatcagaa
cattcctacctccacagtctggagattctgatccggatgtttaagaactcagcggagctc
agtggcaccatgactaagaccgagcaccaccacctcttctccaacatcacagacgtgtgt
gaggccagcaagaagttttttaaagagttagaggacaagcaccagcagaacattgttata
gatgacatcagtgacatagtgttcagacacgcccagtccaactttgacccctacatcacc
tactgctccaatgaggtttaccagcagaggacccttcagaggctagttagtagtaagaat
ccagtgtttaaggaggcgttgactcgtattgaggcccacccagactgcaggaacctcccc
atgatctccttcctaatcctgccaatgcagagagtcacccgcctgcctctgctgatggac
gtcatttgtcagaaggctcctaaagactctgcccagtatgagacctgtaagcaagccctc
caatcagtcagcaaggtggtgcgtaagtgtaacgaaggggcccgtaccatggagagaaca
gagatgatgtacaccatcaactcccaactggagtttaagatcaagcccttcccactggtg
tcgtcctctaggtggatggtgaagcgaggggagctcatagccttcgtggaggagaacggt
atcttctccaagaggacgtcacggcagcaggtctacttcttcctcttcaacgacgtcctc
atcctcaccaggaagaagagtgaggacagctatgcagtgatagactatgctctgagggac
catatctgggtgggaccctgccaggctgaggatgtcaacctatcacccgtcagaagcacc
gctggaatgctgacatcacggcagcccggggccagccacatcttccgcctgcgtttccgt
agcaaccattccggagacaaggtgcccatggtcctgggggtggagctaatgaatgagcgt
gctcgctggatcagtgctctgggtcagagcagcaatgacaagaagaaccaagaccgaaca
aatgccatgcaggtggaggtgacaaggacgtacacagccaagcagcctgatgagctttca
ctgcaggtggctgacgtggtcctggtgtcacagactgtggaggatggctggtatgagggc
gagcgactccgtgatggcgagaggggttggttcctgtcagaatgtgctgaaccaatcacg
tgccaggccactattgagcgcaacatgcagaggatggaccgcctccaggggctggaaacc
aatgtgtga
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