Coregonus clupeaformis (lake whitefish): 121566858
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Entry
121566858 CDS
T08357
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121566858 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121566858 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121566858 (usp16)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121566858 (usp16)
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121566858 (usp16)
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121566858 (usp16)
BRITE hierarchy
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
121566858
NCBI-ProteinID:
XP_041732680
LinkDB
All DBs
Position
5:39873789..39902244
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AA seq
889 aa
AA seq
DB search
MVKRRQKGPREDEVIDLTGPSCSHIRKGVDHSFLKKPGIDYTRNSCQDCKDEEPAAAVED
PSEEMRETPMIWMCLKCGHRGCGRTSEDQHAIKHYEKPRSDPHCLVLSLDNWSVWCYICD
DDVQYSKTGHLAQLVNNVKKQALSEPRNQSPQRKHSTVKLEDSLIEEPQETKPEVKEEKE
NAVTQPKENQKKNAKKEKESVLKESCSLTKGQKAGGGASSGAVSVRGLSNLGNTCFFNSV
VQTLSQTQMLREVINKVTAEEKTSVTITPGVSSDLEPIRVQLGPPGSLTMAMCQTLNEIQ
ETKKGVVTPRELFSQVCKKAVRFKGFQQQDSQELLRYLLDGMRAEEMKRLSSGISEALKK
HGRDAEQSKTLVKEYEKKGAPSNFVDQVFGGEMTSTVMCQQCKTVSLVKEMFLDLSLPVS
DQAYRKKSQKNGTGNQKASSKVKYNNGDSPSPVSMTNGDSDDLPTGVGSKYQQKKQKKQA
KKQAKNQRRQQTLVTLDSLTPSENTAESPSPAEEGEEGKDAEGVEEESLGENQSSEAERS
EAAPSEQDQEKPQGAGHREKEEEEDCEPVAIWSVSNNHSTVMSEEQSPQSTEGVVKGDGH
EAEQRGEEEEEDDDGDAAKPSGDEEEEETKVTDKLGELSLNEAFLASEDTDLELGGGDGD
TSAETEMETELEGKEYTVSHLDPELAFHTLATRAAPEKHECSVESCLYQFTEVENLTQNN
SLLCVTCTKRQTKNKAAEGSKKNVYTDGLKQMLISSSPPVLTLHLKRFQQIGYSVCKVNS
HVNFPHILDIAPFCSVVCKGVSEGESQVLYSLYGIVEHCGTMRGGHYTAYVRARRHCPSP
TTHNGVGTQGQPEPVKGAWFHVSDSSVQPVTESKVQSSQAYLLFYERIS
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagaggaggcagaaaggtcctagagaggacgaagtgattgacctgactggtcca
tcgtgcagccatatccgtaaaggtgtagaccacagcttcctgaagaagcctgggatagac
tacacgcgtaacagctgccaagactgtaaggatgaagagccggctgccgctgtagaggat
ccatcagaggagatgagagaaacaccgatgatatggatgtgcttaaaatgcggacacaga
ggatgtgggcgtacctctgaggatcagcatgccatcaagcactatgagaagcctcggtca
gaccctcactgtctggtgctcagcctggacaactggagcgtctggtgttacatctgtgac
gacgatgtccagtactctaaaacaggccatctggctcagctggtgaacaacgttaagaaa
caggccttgtctgagccccggaaccaaagtccacagagaaagcattcaacagtgaagctg
gaggacagcctgatagaagagccacaggaaaccaagccagaagtaaaggaagagaaggag
aacgcagtgacacaaccgaaagaaaaccagaagaagaacgccaagaaagagaaagaaagc
gttttgaaagagagctgcagtttgactaaaggtcagaaggcagggggaggagccagcagc
ggtgcagtgtcagtgagaggactcagtaaccttggaaacacctgtttcttcaactctgtt
gttcagaccctctctcagacacagatgttgagagaggtcatcaacaaggtgacagctgaa
gagaagaccagtgtcaccatcacgcctggagtctcctcagacctggaacccatccgggtg
cagctaggtcctccggggtctctgaccatggcgatgtgtcagactctgaacgaaatccag
gagactaagaagggggtggtcaccccgagagaactcttcagtcaggtctgcaaaaaagcg
gtgaggtttaaagggtttcagcagcaggatagccaggagcttctccgctacctgctggat
gggatgagagctgaagagatgaaaagactgagctctggaatatcggaagcactgaaaaaa
catggaagagatgctgaacaatctaagactttagtcaaggagtatgagaagaagggagct
cctagtaactttgttgaccaggtgtttggtggggagatgaccagcacggtcatgtgtcag
caatgcaagacggtgtctttggtcaaggagatgtttctggatctgtctcttcctgtctca
gaccaggcctacaggaagaagagtcagaagaacggaacagggaaccagaaggctagcagt
aaggtgaaatataataacggagacagccctagccctgtctccatgaccaacggtgacagt
gatgaccttcctactggcgtgggcagcaagtaccagcagaagaagcagaagaaacaggcc
aagaaacaggccaagaaccagagacgtcagcagacgctagtcaccctggacagcctcaca
ccttcggagaacaccgcggagagcccatccccagcagaggaaggggaggaagggaaggat
gcagagggagtggaggaggagtctctgggtgagaaccaatcatcagaggccgagaggtcc
gaggctgctccctcagagcaggaccaagagaaacctcagggggctgggcacagagagaaa
gaggaggaggaggattgtgaaccagtggctatatggtctgtgtccaacaaccactccact
gtgatgtcagaagagcagagtccccagtccactgagggggtcgtaaaaggagacggacac
gaggctgaacagagaggagaggaggaggaggaggatgatgatggtgacgcagccaaaccg
tctggagatgaagaggaggaagagaccaaagtgacagacaagctgggtgaactatctctg
aacgaagctttcctagcctctgaggacacagacctggagcttgggggtggagacggagac
acgtctgctgagacagaaatggagactgagctggaggggaaggagtacacagtctctcac
ctggaccctgagctggcctttcacacgctggccaccagggcggcgccagagaaacacgag
tgctctgtggagtcctgtctgtaccagttcacagaggtagagaacctcactcagaacaac
tctcttctctgtgtcacctgcaccaagagacagaccaaaaacaaggctgcagaaggctcc
aagaagaatgtgtacacagatggtctgaagcagatgctgatctcgtcttcccccccggtg
ctcaccctccacctgaagagattccagcagattggatacagtgtgtgtaaggtgaacagc
catgttaacttccctcacattctggacatagcaccgttctgctctgtcgtatgcaagggt
gtgtcggagggggaatctcaggtgctgtacagtctctatggtatagtagaacactgtggg
actatgagaggaggccattatacagcttacgtcagagccagacgtcactgcccctccccc
actacacacaacggagtgggcacacaaggccagccagagccggtgaaaggggcgtggttc
catgtgagtgacagcagtgtgcagccagtcacagagagcaaagtgcagagctcccaagcc
tacctcctattctacgagaggatctcctag
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