Coregonus clupeaformis (lake whitefish): 121566888
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Entry
121566888 CDS
T08357
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00061
Fatty acid biosynthesis
cclu00071
Fatty acid degradation
cclu01100
Metabolic pathways
cclu01212
Fatty acid metabolism
cclu03320
PPAR signaling pathway
cclu04146
Peroxisome
cclu04216
Ferroptosis
cclu04920
Adipocytokine signaling pathway
Module
cclu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121566888
00071 Fatty acid degradation
121566888
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121566888
09143 Cell growth and death
04216 Ferroptosis
121566888
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121566888
03320 PPAR signaling pathway
121566888
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cclu01004
]
121566888
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121566888
Enzymes [BR:
cclu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121566888
Lipid biosynthesis proteins [BR:
cclu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121566888
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of breast milk
121566888
Exosomal proteins of breast cancer cells
121566888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121566888
NCBI-ProteinID:
XP_041732721
LinkDB
All DBs
Position
5:complement(32059369..32098278)
Genome browser
AA seq
721 aa
AA seq
DB search
MKLKEDLNPMLLLLFQVTVWLYSILAFLPSYLFSSVSESDAGLGSEQERAQRLKAHSVTG
RPAGPYRAMGTTKRLVSSLHPGVDTLDKVFEDASRRFPDRDCLGTREVVMEEDERQSNGK
VFKKVILGQYRWLSYAETHKAAARFGSGLAALGQRAHNNIAIFCETRAEWVIAAQACFMQ
NFPLVTLYSTLGGPAITHGLNETEVSHIITSRELLETRLKFILLEVPRLQHIIVVDDTPT
KWPGYPRGISVHNMATVQELGTKPENGKHTVSRGRKQPMPSDIAVIMYTSGSTGIPKGVM
ISHSNIIAGITGMAERIPNLGENDTYIGYLPLAHVLELSAELVCVAHGCRIGYSSPQTLA
DQSTKIKKGSKGDTSVLQPTLMAAVPEIMDRIYKNVMTKVEEMSSAQRTLFTLAYNYKLE
QLSKGHSTPLCDNLVFKKVRSLLGGKTRVLLSGGAPLSAATQRFMNVCFCCPVGQGYGLT
ETCGAGTISEMWDYSTGRVGGPLVCSEIKLKDWVEGCYHSTDTPNPRGEILIGGPNVTMG
YYKNEAKNQDFFVDDNGQRWFCTGDIGEIHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEA
MLKNCPLIDNICAYANSDEMYVIGFVVPNQKHLLSLAEQYRIRGSWEELCNNAAMEEVVL
QVITEAALSAQLERFEIPRKIRLSPDPWTPETGLVTDAFKLKRQQLKSKYQDDIERMYGG
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaagaggatctgaacccgatgctgctgctgctcttccaggtgacagtgtgg
ctgtactctatcctagccttcctcccctcctacctcttcagctctgtgtcagaatcagac
gcaggcctcggctcagaacaggagagggctcagagactcaaggcccattctgtgacgggt
cgccccgcgggcccctacagggctatgggcaccaccaagaggctggtgtcgtccctgcac
cccggggtggacacactggataaggtgtttgaggacgcatccagaaggttccctgacaga
gactgcctgggcaccagagaggtggtcatggaggaggatgagcgacagagcaacggaaag
gtcttcaagaaggtgatcctggggcagtaccgctggctgtcctatgctgagacccacaag
gcagcagcccgctttggcagtggtcttgcagcgctgggccagagggcccacaacaacatt
gccatcttctgtgagaccagggctgagtgggtcatagccgcacaggcgtgcttcatgcaa
aacttccctttggtcactctgtactctaccctggggggtccggccatcactcacggtctg
aacgagacagaggtcagtcacatcatcaccagcagagagctactggagaccagactcaag
ttcatccttctggaggtgcccaggctgcagcacatcatcgtggtggatgacacacccacc
aagtggcccggttacccacgaggcatcagtgtccacaacatggccaccgtccaggagctg
gggaccaagcctgagaatggtaaacacacagtgtctcgtgggcgtaaacagcccatgccc
tctgacatcgctgtcatcatgtacaccagcggctccactggcatacccaagggcgtcatg
atctcccatagtaacatcattgctggcatcactggcatggcagaaaggatacccaacctg
ggtgagaatgacacctacatcggatacctccccctggcccatgtgttggagctgagtgca
gagctggtgtgtgtggctcacggctgcaggatcggatactcctccccccagacactagcg
gaccagtcaacaaagattaaaaaaggcagtaaaggagacaccagtgttctgcaacctact
cttatggcagctgtgccggagataatggatcgtatctataagaatgtgatgaccaaggtg
gaggagatgagcagtgctcagaggactctgttcactctggcctacaactacaagctggag
cagctctccaaaggacacagcacaccgctgtgtgacaacctggtgtttaagaaggttcgg
tccctcctgggggggaagaccagggtgctgctgtcgggcggggcgcccctctctgccgcc
acccagcgcttcatgaacgtgtgcttctgttgccccgtgggccagggctacggcctcact
gagacgtgcggagctggcaccatcagcgagatgtgggactacagcacggggcgagttgga
ggaccgctcgtttgttctgaaatcaagctcaaggattgggtggagggttgctaccacagc
acagacacgcccaacccacgaggcgagatcctgattggcgggcccaacgttaccatgggt
tactacaagaacgaggccaagaaccaggacttctttgtggacgacaacggccagcgctgg
ttctgtacaggagacataggagagatccatcctgatggatgcctcaagatcattgatcgt
aagaaggacctggttaagctccaggctggagagtatgtgtctctggggaaggtggaggcc
atgctgaagaactgcccccttatagacaacatctgtgcctacgccaacagcgatgagatg
tacgtgattggctttgtggtgcccaatcagaagcatctgctgtcgctagcggagcagtat
cgtatccggggctcgtgggaggagctgtgtaacaacgctgccatggaggaggtggtcctg
caggtcatcactgaggccgccctatcagcccagctggagcggtttgagatcccccgtaag
atccgtctgagtcccgacccctggacccccgagacgggcctggtgactgacgccttcaag
ctcaaacgccagcagctgaagagcaagtaccaggacgacatcgagagaatgtacggcggg
aaatag
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