Coregonus clupeaformis (lake whitefish): 121567002
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Entry
121567002 CDS
T08357
Name
(RefSeq) liprin-alpha-3 isoform X1
KO
K26226
liprin-alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121567002
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121567002
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
121567002
NCBI-ProteinID:
XP_041732880
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Position
1:complement(33439417..33499807)
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AA seq
1238 aa
AA seq
DB search
MMMCEVMPTISEDGRSGGPSSPGVGAGIGGPGGAMGGGGYGGRGESRGAVDEGGSTGNLE
SLMVNMLTERERLLESLRETQDSLGTAQLRLRELGHEKDSLSRQLSIALPQEFAVLTKEL
NVCREQLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSE
VEVLKALKSLFEHHKALDEKVRERLRVALERVTLLEDQLQASAQEVISLRDQIKRRQQGL
DGGKDRLPNGPSSGLDDGEIDRQRETEIERQRAELSQLKERLALMCRQVGEIEEQLAAAR
REVTKSEEANQKLQRDVKEALCQREDMEERITTLERRYLSAQREATSLHDIKDKLENELA
SKESLHRQSEEKNRQLQERLDDAKQKLQQTLQRAETLPEIEAQLAQRVAALNKAEERHGN
FEERLRQMEAQLEEKNQELQRARQREKMNDEHNKRLSDTVDKLLSESNERLQLHLKERMA
ALEEKNSLSEELANMKKIQDDLLANKDQLIAELERIQMELDQLRGRPGSSYSRLATMELQ
GASNVSSLPSTLFRRSLPGSASELRYPQGGGSLPAGYGSSSSGVVVRRAHRGRWAPPRDD
SNKYGEWDSGNMLGPGFEGGVEGGCSDDEDDRETLFGSELLSPSGQTDVQTLAIMLQEQL
EAINKEIKLIQEEKESTELRAEEIESRVSSVALDSSPLPPSSLGGGRDSVGRGYMTPSLT
SSTLASPSPPSSGHSTPRLPHSPARASDRQNSKEGDDCRALALIDSTPPPVPRALRLDRM
THTHPGAGLDDHREFRSSQDSLHKASKKKSIKSSIGRLFGKKEKGRIGGPGSQSASLAST
PSDDLGTADPLGLAKMGTGTVEKDRRSKKKHDLLEEACRQGLPFASWDGPTVVTWLELWV
GMPAWYVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPA
STRSSTSDIWMTHAEMESLTAAIKPEVKEFSWDQILAYGDMNHEWVGNEWLPSLGLPQYR
SYFMESLVDARMLDHLTKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKELERRRDES
QHQNQDVMVWSNERVMCWVQAIGLKEFADNLTESGVHGALLALDDTFDYTDLALLLQIPN
QNTQARQMLEKEYNALISMGTERRPDEDGTKTFTRSPSWRKMFREKDLRGVTSDSSETLP
ANFRASAISTPSVTLRKVQSEVNSGPRGESGSVRTYSC
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtgtgaggtgatgcccaccatttcggaggacgggcgcagcggaggcccctcc
tctcccggggtcggggctgggattggaggccctggtggggccatggggggagggggctac
ggtggccgaggggaatccaggggcgcggtcgacgaggggggcagcacagggaacctggaa
tccctgatggtcaacatgctgaccgagagggagaggctgttggagagcctgagggagacc
caggacagccttgggacggcccagctacgcctcagagagctgggccacgagaaggactcc
ctctcgagacagctgtccatcgccctgccacaggagtttgctgttctgactaaggagctg
aatgtttgccgggagcagctactggagagggaagaggagatttctgagctcaaggcggag
agaaacaacacacgtttgttactagagcacctggagtgtcttgtgtctcgtcatgagcgc
agtctgaggatgacagtggtgaagaggcaggcccagtccccggcgggggtctccagtgaa
gtggaggtcctcaaggccctcaagtccctgtttgagcaccacaaggctttggatgagaag
gttcgagagcgactccgtgtggcccttgagagagtgacccttttggaggatcaactacaa
gcatccgctcaagaggttatctctttaagagaccaaattaaaagacgacaacaagggttg
gacggcgggaaagatcgcctacccaatggaccctcctctggattggacgatggtgagatc
gacagacagagagaaacggagatagagcggcagagagccgagctctcccagctgaaagaa
agactggcccttatgtgtcgacaggttggggaaatagaggaacagcttgcagccgccagg
agggaggtgacgaagtcggaggaggccaatcagaagctccagagggatgtgaaggaggct
ctgtgccaaagggaggatatggaggagaggatcaccacattagaacgcaggtacctcagt
gctcagagggaagcaacctctctacatgacatcaaagacaagctggagaatgagcttgcc
agcaaggagtcactgcacagacagagtgaggagaagaacaggcagctccaggagcgtctg
gacgacgccaagcagaagctccagcagaccctgcagagggccgagacactgcccgagatc
gaggcccagctcgcccagagagtggctgccctcaacaaggcagaggaacgccatgggaac
tttgaggagcgactacgacagatggaggcacaacttgaagagaagaatcaggagttgcag
agggcaaggcagagagagaaaatgaatgacgaacacaacaaacgcctctcggatacggtg
gacaagctactgtctgagtccaacgagagactgcaacttcacctcaaagagagaatggct
gcccttgaggagaagaattcactgtcagaggagctagcaaacatgaagaaaatccaagat
gatcttctagcaaacaaggaccagctcatagctgagctggagaggattcagatggagctg
gatcaactgaggggcaggcctggctcttcctattccaggttagccacaatggagcttcaa
ggggcgagcaacgtgagctcacttccctccaccctttttcgaagatctcttccagggagt
gcctcagagctccggtacccccagggtggtggctccctcccagccggctacggcagctcc
tctagtggcgtggtggtccggagggcacatcgcggccgatgggctccccccagggatgac
agcaacaagtatggagagtgggacagtggcaacatgctgggtcccgggttcgagggggga
gtcgaggggggctgctcagatgacgaggatgacagggagaccctgtttggctcagagctg
ctctcgcccagcggacagacggacgtgcagacccttgccatcatgctgcaggagcaactg
gaggccatcaacaaggagatcaagctgatccaggaggagaaggagagcactgagctgagg
gcagaggagatcgagagccgggtgagcagcgtggccctggactcctcccctctccccccc
tcctcactgggcgggggcagagacagtgtggggaggggctacatgaccccctcccttacc
tcctccaccctggcctccccttcgccccccagctctggacattccaccccccgactgcca
cattcccctgccagagcgtcagacagacagaacagcaaagagggcgacgactgccgggcg
ctagcattgattgactccacacctcctccggttcctcgtgctctgcgattggacagaatg
actcacacacacccaggggctgggctggatgatcaccgcgaattccgcagtagtcaggac
tctctccacaaagccagcaagaagaagagcatcaagtcctccattggacgcctgtttggg
aagaaggagaaggggaggatcggaggacctgggagtcagtctgcctctctagcctccacg
ccctctgatgacctgggcacagccgaccccctgggcctggccaagatgggaactggcacc
gtggagaaagatcgccgcagcaagaagaaacacgacctgctagaagaagcatgtcgccag
ggtctaccctttgcttcatgggatggccccaccgtggtcacctggcttgagttgtgggtg
ggcatgcccgcctggtatgttgcggcgtgtcgtgccaatgtgaagagcggtgccatcatg
gccaacctgtcggacacagagatccagcgggagattggcatcagtaaccccctgcaccgc
ctcaaactgcgcctggccatccaggagatggtgtccctcaccagcccctcggcaccggcc
agcacacgctcctcgaccagtgatatatggatgactcatgctgaaatggagtcactgacc
gctgccataaaaccagaagtgaaggagttcagctgggaccagatccttgcctatggggac
atgaaccatgagtgggtagggaacgagtggcttcccagcctgggtctgccccagtaccgc
tcctacttcatggagtccctggtggacgctcgcatgctggaccacctcaccaagaaggag
cttaggggacagcttaaaatggtggacagcttccacagggtaagtctgcattatggcatc
atgtgcttgaagcgtttgaactacgacaggaaggagcttgaaaggaggagggatgagagc
caacatcagaaccaagatgtgatggtatggtccaatgagcgagtgatgtgttgggtccag
gccattgggctaaaggagtttgcagataacctcacagagagtggggtccatggggccctc
ctagcactggatgacacgtttgactacactgaccttgccctgctcctccagatacccaat
cagaacacacaggcgaggcagatgctggagaaggagtacaatgccctcatctccatggga
actgagagaaggccagatgaggacggcactaagacgttcacacgctcgccctcgtggagg
aagatgttcagagagaaggacctccggggcgtgacctctgactcctcagaaacattaccc
gccaacttccgtgcctccgccatctccacgccctccgtcaccctgaggaaagtccagagt
gaagtgaactctgggcccaggggtgagtcggggtcagtgagaacatattcctgctag
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