Coregonus clupeaformis (lake whitefish): 121567091
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Entry
121567091 CDS
T08357
Name
(RefSeq) calpain small subunit 1
KO
K08583
calpain, small subunit 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121567091
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C2: calpain family
121567091
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GFIT
Motif
Pfam:
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
121567091
NCBI-ProteinID:
XP_041732967
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Position
5:14930516..14936752
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AA seq
246 aa
AA seq
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MSAITSVSADFSNTLVAAPFVDFHLKFLIKMFLAKKLIGGILDVVSNVDPSQFVPSEPPP
PRRPLAYAKPKENDEEAQFRKVFQQLAGDDMEVSPTELMNILNRIIGKRTDLKTDGFSIE
SCRSMVAVMDSDSSGKLGFHEFKYLWNNIKKWQGIYISNDADRSGIISSQELPAAFRAAG
FPLNDQLFQLIGRRYSDEQGNMDFDNFIGCLVRLDAMCRAFKTLDKDDNGSIKVNIKEWL
QLTMYS
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccatcacatcagtctctgccgacttcagcaacacattggtcgctgctcctttt
gtagattttcacctgaagttcctcatcaagatgtttctagccaaaaaactaattggtggc
atcctggatgttgtgagcaatgttgaccccagtcaatttgtgccctcagagcctccccca
ccacgcagacctctggcctacgctaagccgaaggagaatgacgaggaggcacagttccgc
aaggtgttccagcaactcgctggggatgacatggaggtcagccccactgaactgatgaac
atccttaacaggatcattggcaaacgtactgacctgaagactgacggctttagcatcgag
tcatgcaggagcatggtggctgtcatggacagcgacagctcaggaaagctaggtttccat
gagttcaagtatttatggaacaacatcaagaaatggcagggcatctacatatcaaatgac
gcagaccgctcagggatcatctcctcacaagagcttcccgctgccttcagagctgcaggc
ttccctctcaacgaccaactattccagttgatcggccgcaggtacagtgacgaacagggc
aacatggactttgacaacttcattgggtgcctggtgagactggacgccatgtgtcgagct
ttcaagactctggacaaagatgataatggaagtatcaaagtcaacatcaaggagtggctt
cagttgaccatgtactcataa
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