Coregonus clupeaformis (lake whitefish): 121567112
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Entry
121567112 CDS
T08357
Name
(RefSeq) proteasome subunit alpha type-6-like isoform X1
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121567112
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121567112
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cclu03051
]
121567112
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
121567112
Peptidases and inhibitors [BR:
cclu01002
]
Threonine peptidases
Family T1: proteasome family
121567112
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
121567112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Peptidase_M17
Motif
Other DBs
NCBI-GeneID:
121567112
NCBI-ProteinID:
XP_041732985
LinkDB
All DBs
Position
5:18102550..18106847
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AA seq
246 aa
AA seq
DB search
MSRGSNAGFDRHITIFSPEGRLYQVEYAFKAIAQGGLTSLGVRGTDCAVVVTQKKVPDKL
LDSATLTNMYPLTPRIGCVMTGHNADSRSQVHRARVEAAEWKYKFGYDITADMLCRRMAD
ISQVYTQNAEMRPLGCCMILVAMDPQLGPMLFKCDPAGYFCGFRATSVGAKQTEANSYLE
KKLKKRPELSYEMTVELAISCLSSILSMDFKPSEIEVGVVTKESPKFRTLSETEIDTHLV
AIAERE
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtggttcgaatgctggatttgaccgacacattacgattttttctcctgagggc
cgcctctatcaagtcgagtatgccttcaaagccatcgcgcagggtgggttgacatcactg
ggcgtgcgggggacagactgtgctgtggtggtcacacagaagaaagtgccggacaagctg
ctggattctgccactctgaccaacatgtacccacttaccccacgcattggatgtgtgatg
acaggacacaatgcggacagtcggtcccaggtccacagggcacgagtggaggctgccgaa
tggaagtacaagtttggatatgacatcacagcagacatgttgtgtcggagaatggcggac
atctcccaggtctacacacagaacgctgagatgagacctctgggatgctgtatgatcttg
gtggccatggacccccagctgggtcccatgctgtttaagtgtgacccggcaggctacttc
tgtggcttcagggccaccagcgtgggggccaagcagacagaggctaacagctacctggag
aagaaactgaagaagaggccggagctgtcatatgagatgactgtggagttggccatctcc
tgtctctcttctattctgtccatggacttcaagcccagtgaaattgaagtgggtgtggtc
actaaggaaagccccaagttcaggacactctctgagacagagatcgacacccacctggtt
gccattgctgagcgggaatag
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