KEGG   Coregonus clupeaformis (lake whitefish): 121567192
Entry
121567192         CDS       T08357                                 
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cclu01009]
    121567192
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121567192
Protein phosphatases and associated proteins [BR:cclu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121567192
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    121567192
SSDB
Motif
Pfam: zf-B_box ANCHR-like_BBOX zf-C3HC4_4 zf-RING_UBOX fn3 zf-C3HC4
Other DBs
NCBI-GeneID: 121567192
NCBI-ProteinID: XP_041733058
LinkDB
Position
5:complement(32893343..32897727)
AA seq 609 aa
MPGTDSESGCWPRSRSSKKRDNHKAKHAGKEIGAKDAQTKAELDPVSHSLAFHLCCPACD
TLLLQPVSLPCGHCLCQPCLEGIRKKPSSTKASDAEQPQPCSQCPRCLVHYSLQPGGAWP
FPENLLLANVAEQLLERLEGLRRVKQPKNTRAKETALRVTTCEICSKQREAQRYCRTCGL
NYCAKCLRKLHGNRAFQAHVLTEPVEGGCRDPCPTHHDRSLSHCCLDDGALGCQECMEQG
HQGHDVSPVHEARARREVGIRNSLEQAAKVKSQCEADMVSMDQLRARTGSDGAELRRRVR
EGFLSLRNVLLDQEAALLSHLDNLNSSTRSRARDFLQTSAPLLGSLTGLEVISEQALLEP
NTVAFLTGAVALTQWLQRVNGDIHRPALTLQEGEPFKGVKMDFDTLLRDLQGLLGTHLHW
KSPEVAAVVAAATDVEAAVLEGCCEVVQVPSCPGTPHRTLALADSPRSPRTPRSPRKVVM
EEQVGLSAGDCSDKEHHLLPRPPIIYQHIVSGATVEIFWMLPMGEEVETFDVHFQDAVIV
GMAMEEGKGVVLVGLKTCNLQTAGLRLDTHYLFRARSVNSHGAGEWSSSYRVNTERQGDE
AKAAVTQEI
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgcctggtactgattctgaatccggctgttggccgcgctcgaggtcttcgaagaagcgc
gacaaccacaaagccaaacacgcgggaaaagagataggcgctaaggatgcccagaccaaa
gctgagctagacccggtgagccactccctggctttccacctgtgctgcccagcctgtgac
accctcctcctccagcccgtgtctctgccctgtggccactgcctctgccagccctgcctg
gaaggcatccgcaagaagccctccagcaccaaggcctctgatgccgagcagccccagccc
tgctcccagtgcccccgctgcctggtccactactccctccagcccggcggggcctggccc
ttcccagagaaccttctcttggctaacgtggctgagcagctcctggagaggctggagggc
ctgaggcgggttaagcaacccaaaaacacccgggccaaggagacagccctgagggtgacc
acctgcgagatctgctctaagcagcgcgaggcccagcgctactgccgcacctgcggcctc
aactactgtgccaagtgcctgagaaaactccatggcaaccgggctttccaggcccatgtg
ctgacagagcccgtggagggcgggtgccgcgatccgtgccccacccaccatgaccgctct
ctgtcccactgttgccttgacgacggagctctggggtgccaggagtgcatggaacagggg
caccaggggcacgacgtatcaccagtccacgaggcccgcgcccgcagggaggtgggcatc
cgcaattccctagagcaggctgcgaaggtgaagtcccagtgtgaagccgacatggtgtcc
atggaccagttgagggcccggacgggctccgacggtgccgagctgagacgccgtgtgcgc
gagggcttcctgtctctccgtaatgtcctgctagaccaggaggcagcgctgctctcccac
ctggacaacctgaactccagcacccgcagcagagccagggacttcctccagacctctgcc
ccactcctgggctccctgactgggctggaggtgatctctgagcaggccctcctggagccg
aacaccgtggccttcctgaccggggccgtggctctgacccagtggctgcagagggtcaac
ggggacatccatcgccctgccctgactctccaggagggggagcccttcaagggggtgaag
atggactttgacaccctccttagagacctgcagggcctgcttgggacccacctccactgg
aagagccccgaagtggctgcagtggttgccgcggcgaccgacgtggaggcagccgttttg
gaggggtgctgtgaggtggtgcaggtgccatcctgcccagggacccctcaccgcaccctg
gccctggcggactccccccggagcccccggacccccaggagccccaggaaggtagtgatg
gaggaacaggtgggcctgtcggctggggactgcagcgataaggagcaccacttgctgccc
aggccccccatcatctaccagcacatcgtcagcggagccactgtggagatcttctggatg
ctgcccatgggcgaggaggtggagacctttgatgtccacttccaggatgctgtgatcgtg
gggatggctatggaggaggggaagggagtggtcctggtggggctgaagacctgcaacctg
cagacggccgggctccgcctagacacacactacctgttccgggcacgctctgtcaacagc
cacggagccggggagtggagctcctcctacagggtgaacactgagcgccagggagatgag
gccaaggcagccgtgacacaggaaatctaa

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