Coregonus clupeaformis (lake whitefish): 121567288
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Entry
121567288 CDS
T08357
Symbol
zgc:162872
Name
(RefSeq) BAR_ACAPs and ArfGap_ACAP domain-containing protein
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121567288 (zgc:162872)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121567288 (zgc:162872)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121567288 (zgc:162872)
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121567288 (zgc:162872)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121567288 (zgc:162872)
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121567288 (zgc:162872)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
PH
Ank
Ank_4
Ank_5
SOS1_NGEF_PH
PH_8
Motif
Other DBs
NCBI-GeneID:
121567288
NCBI-ProteinID:
XP_041733139
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All DBs
Position
6:complement(9825084..9841952)
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AA seq
718 aa
AA seq
DB search
MDTFMDYKECIKDSPAFRLTLDKCQTDVAELQSHVEKVMKLCGKMVESGQAYNTANQNFL
AGVAEFSTYHKRDSVIMNCMSQFIQGLQEMINFHTVLFDQTQRAITQQLSNLLTKFIPQL
GETRKEFVRIGEALETAAVKNAQIFRHKVTDAERASHLLLATRKCHQHFALDYCLQLNNF
KAQQKLDILNSVFSYFHAQYTFFHQGFDLLRDLEPTMKTMVTQLAQLSTECTAKRKDLEN
THLLFQQTEASGEPILSSCPDGGETIQGHLFKRSRRKNKTWKRCWFSIKDNQLVYTKSHK
EEPVSLFDDLRLCAVKSLDSIDRRFCFELVSVQKCCVLQADSEELKQAWISAVQGSIDMA
YRGRVESQQPQPKESLLPLQSPSDPQPGQPPQRPAALVVALQSPGNHRCCDCSEEDPRWA
SVNLGITMCIECSGIHRSLGVHLSKVRSLTLDSWDPEQLKLLCGLGNDVINGIYEFRCAA
EGRVKPIAASPRPEKETWIKEKYVEKRFVKDDSLPETQRRENAGRQMYQAACQGDLVTMA
SALAQGAEVNWSHAEEEGRTALIGSAFGGSLTACEFLLQNGANVNYRDQRGQGALHTAAT
WGHTGQVCLLLKKGANQYAVDERGQDPLAIAIETAHADIVTLLRMARMNEEMRDSEGFFG
SMGDDETFQDIFRDFSDMASHDPERLTRRQFSRSGEEEGQEKRIVNHQRKAEEEEEET
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggatacattcatggactataaagaatgcatcaaggactcacctgcattcaggcttacc
ctggataagtgtcagaccgatgttgcagagctgcagagtcacgtggaaaaggtgatgaag
ctctgtggcaagatggttgaatcagggcaagcatacaacacagcaaatcagaatttcctc
gccggagtggctgagttctcaacatatcacaaacgtgacagtgtcatcatgaactgcatg
agtcaattcatccaaggactacaggagatgatcaactttcatacagtgctgtttgaccag
acgcagagagctatcactcagcagctgtcaaaccttctcacaaagttcataccccagcta
ggagagactaggaaggagtttgtgcggattggggaggctctcgagacagcggcggtgaaa
aatgcccagatattccgccacaaagtcactgatgcagagcgcgccagccatctgctgttg
gcaacacgcaaatgtcaccagcactttgcccttgattactgcttgcagctgaataacttc
aaggcccaacagaagctggacatcctaaattctgtgttctcctacttccatgcccagtac
accttcttccaccaaggctttgacttgctgagagacttggagcccactatgaagaccatg
gtcacacagcttgcccaactctcgactgaatgtacagctaaaagaaaggacctggagaat
acccacctactgttccagcagacagaggcctcaggggagcccatactaagttcttgtcct
gatggtggggaaaccatacagggccacctcttcaaaagatctcggagaaagaacaagaca
tggaagagatgctggttctccattaaagacaaccaattggtgtacacaaagtcacataag
gaggagcctgtgtcgctgtttgatgacctcaggctgtgtgcggtgaagtctctggacagc
attgaccgccgcttctgttttgagctggtttctgttcaaaaatgctgtgtcctccaggct
gactcagaggagctgaagcaggcttggatcagtgccgttcagggaagcatagacatggcc
taccgcgggagagtggagtcccagcagcctcagcccaaagaaagccttctgcctctccag
agcccatcagacccccagccaggacagcctcctcagaggcctgcggctctggttgtggcc
cttcaaagtccggggaaccaccgttgctgtgactgcagtgaggaggacccacgctgggcc
agcgtcaacctgggtatcaccatgtgcatcgagtgctccggcatccacaggagccttggg
gtccatctctccaaagtgcgatctctcaccctagactcctgggatcctgaacagctgaag
ctgctgtgtggtctgggtaatgatgtcatcaatgggatatacgagttcaggtgtgcagca
gagggcagagtgaagcctattgctgccagccctcgcccagagaaagagacatggattaaa
gagaaatatgttgagaaaagatttgtaaaggatgacagcttgcctgaaacacagaggagg
gagaacgcagggcgccagatgtaccaggctgcttgccaaggggacctggtcaccatggca
tccgcgttggcccagggggcagaggtgaactggagccacgctgaggaggagggacgcacc
gctctcattggctcagcttttgggggttcccttacggcctgtgagttcctgctgcagaat
ggagccaatgtaaactaccgtgaccagcgtggtcaaggagcccttcacactgcagcaacc
tggggccacacagggcaagtgtgtctacttctaaagaagggagccaatcagtatgctgtt
gacgagagggggcaggacccactcgccattgccatagagacagcacacgccgatattgtg
accctactacgaatggctcgcatgaatgaagagatgagagactccgagggattctttgga
tctatgggtgacgatgagacatttcaagacatcttccgtgacttcagtgatatggcttct
cacgatccagaaagactcacccgtcgacagttcagcagaagcggagaagaggagggacaa
gagaagaggatagtgaatcaccagcgcaaggcagaggaggaggaggaagagacatag
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