KEGG   Coregonus clupeaformis (lake whitefish): 121567327
Entry
121567327         CDS       T08357                                 
Name
(RefSeq) cullin-3-like
  KO
K03869  cullin 3
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120  Ubiquitin mediated proteolysis
cclu04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121567327
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    121567327
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121567327
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121567327
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     121567327
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     121567327
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 RhgB_N DUF6655
Other DBs
NCBI-GeneID: 121567327
NCBI-ProteinID: XP_045073287
LinkDB
Position
6:3554068..3573484
AA seq 767 aa
MSNLSKGGTKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNA
YTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRD
ILMYMDRVYVQQNSVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRG
AIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARI
NEEIERVLHCLDKTTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYK
LFSRVPNGLKTMCECMSSYLREQGKALVSEEGEVKNPVDYIQGLLDLKSRFDRFLLESFN
NDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRF
MQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISN
TTMDEFRQHLQSTAVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLA
KHSGRQLTLQHHMGSADLNATFYGPIKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTI
LMLFNNREKSMFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTV
NDQFTSKLHRVKIQTVAAKQGETDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNV
LVAEVTQQLRSRFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2304 nt   +upstreamnt  +downstreamnt
atgtccaatctcagcaaaggcggcaccaaaaaggacaccaagatgaggatacgagccttt
cctatgacgatggacgagaagtatgtcaacaacatctgggaccttctgaagaatgccatc
caggagatccagaggaagaacaacagcgggctgagcttcgaggagctctacaggaacgcc
tacaccatggtgctgcacaaacacggcgagaagctctacacgggcctccgggaggtggtc
accgagcacctcatcaacaaagtacgggaagatgtcctcaactcactaaacaacaacttc
ctccaaacactgaaccaagcctggaacgaccaccagacggccatggtcatgatcagagac
atcctcatgtacatggaccgggtgtacgtgcagcagaacagcgtggagaacgtctacaac
ctgggcctgatcatcttcagagaccaggtggtgcgctacggctgcatccgagaccacctc
cgacagaccctcctggacatgatcgcacgggagaggaagggcgaggtggtggacaggggg
gcgatcagaaatgcctgtcagatgttaatgatcttaggcctcgaagggaggtcggtttac
gaagaggactttgaggccccgtttttagaaatgtctgcagagtttttccagatggaaagt
cagaagtttttggcggagaacagcgcaagcgtgtacataaagaaagtggaggcgcggata
aatgaggagatcgagcgcgtgctgcactgcctggacaagacgacggaggagcccatcgtc
aaggtggtggagcgggagctcatctccaagcacatgaagaccatcgtggaaatggagaac
tcgggcctcgtccacatgctcaagaacggaaagacagaggacctggcgtgtatgtataag
ctctttagcagagtgccaaacggactgaagaccatgtgtgagtgcatgagctcctacctc
cgcgagcagggcaaggcgctggtgtcagaggagggcgaggtcaaaaaccctgtggattac
atccagggtctgttggatctgaagtcgcgtttcgaccgcttcctcctagagtcgttcaac
aacgaccggctcttcaagcagaccatcgcaggggactttgaatacttcctcaacctcaac
tcgcgctcccccgagtacctctccctgttcatcgacgacaagctgaagaaaggcgtaaaa
ggattgacggagcaggaggtggagtcgatcctggacaaggccatggtgcttttcaggttc
atgcaggagaaggatgtgtttgagaggtactacaaacagcacctggccaggaggctgctc
accaacaagagcgtctcggacgactcggagaagaacatgatctctaagctcaagacggag
tgtggttgccagttcacctccaaactggaaggcatgttccgagacatgagcatctcaaac
acaaccatggacgagttccgccaacacctacagtcaacggcggtgtcgttgggcggagtc
gatctcacagtgagggtcttgacgacaggttactggccaacgcagtccgccacgcccaaa
tgtaatatccccccttctcctcgacatgcatttgaagtctttagaagattttatctggcc
aagcacagcggcaggcagctcacgttgcagcatcacatgggctctgcagacctcaacgcc
accttctacggcccaattaaaaaggaggacgggtcggaggtgggggtgggcggcgcccaa
gtaacaggctccaacaccaggaagcacatactgcaggtgtccaccttccagatgacaata
ctcatgctcttcaacaaccgggagaagtccatgtttgaggagatccagcaggagacagac
atcccggagagggagctggtgcgagcgcttcagtcgctggcctgcgggaagcccacccag
cgcgtcctcaccaaggagcccaagtccaaggagatcgaaaacggccacgtgttcaccgtc
aacgatcagttcacctccaagctgcaccgcgtcaagatccagacagtcgccgctaagcaa
ggagagacggacccggagaggaaggagacgcggcagaaagtggacgacgataggaagcac
gagattgaggcggccatcgtccgcatcatgaagtctagaaagaagatgcagcataacgta
ctggtagcagaggtcacccagcagctgcgatcgcgattcctccccagtcctgtagtcatc
aagaagcgcattgaaggactcattgagcgggaatatttggcgcggacaccggaggatcgc
aaagtgtacacttatgtagcataa

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