Coregonus clupeaformis (lake whitefish): 121567331
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Entry
121567331 CDS
T08357
Name
(RefSeq) short stature homeobox protein 2 isoform X1
KO
K09331
short stature homeobox protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121567331
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121567331
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
MRP-L20
KBP3
HAUS1
AcrF31
Motif
Other DBs
NCBI-GeneID:
121567331
NCBI-ProteinID:
XP_041733228
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All DBs
Position
6
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AA seq
305 aa
AA seq
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MEELTAFVSKSFDQKVKEKKEVITYREVLETGSARAREGLATEPNREEMNDIARADARSP
GREPDMLGPERTRDVGSPKLIDGTTHMKERKEDTKQMEDEAQTKIKQRRSRTNFTLEQLN
ELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKDVLSFLPGV
LIGAASQFEGCRVAPYVNVGALRMPFQQDSHCNVPPFSFQVQAQLQLDSAVAHAHHHLHS
HLAAHAPYMMFPGPPFGLPLATLAAESASAASVVAAAAAAKNTNKNSSIADLRLKAKKHA
AALGL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacttaccgcgtttgtctcgaagtcttttgatcagaaagtgaaggaaaagaag
gaggtgatcacgtacagggaggtgctggagaccggatccgcgcgagccagggagggtctc
gccacggaaccgaatcgtgaggaaatgaacgatatcgctcgggcggacgcgcgatcgcca
ggcagggaaccggacatgctgggaccagagagaaccagggatgtgggaagcccgaaactg
atcgatggtaccacgcacatgaaagagagaaaagaggacacaaagcaaatggaggacgag
gcacagactaaaatcaagcagaggagaagtcggactaactttacactggagcaattgaac
gagctagagcggctattcgatgagacccattacccggacgccttcatgcgcgaggagctg
agccagcggctagggctgtccgaggctcgagtacaagtttggtttcagaaccggagggcc
aaatgcagaaagcaggagaatcagttacacaaagatgtgctatcttttcttccaggagtt
ctcattggagctgcgagtcagtttgaaggttgtcgtgtagcgccatatgtcaacgtgggg
gccttacggatgccattccaacaggatagtcattgcaacgtgccgcccttctcctttcag
gtccaggcgcaactgcagttggacagcgcggtggcccacgcgcaccatcacctgcactct
cacctggcagcgcacgcgccttacatgatgtttccgggccctccgtttggtttgcccttg
gctacgctcgcggctgaatccgcctctgctgcctcggttgtggccgcagctgcagccgcc
aaaaacaccaacaaaaactccagtattgcagatctgagactcaaggccaaaaaacacgcg
gcagctctgggactgtga
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