Coregonus clupeaformis (lake whitefish): 121567336
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Entry
121567336 CDS
T08357
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
cclu04110
Cell cycle
cclu04114
Oocyte meiosis
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04350
TGF-beta signaling pathway
cclu04382
Cornified envelope formation
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121567336
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121567336
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121567336
04114 Oocyte meiosis
121567336
09144 Cellular community - eukaryotes
04530 Tight junction
121567336
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121567336
09158 Development and regeneration
04382 Cornified envelope formation
121567336
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121567336
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121567336
03036 Chromosome and associated proteins [BR:
cclu03036
]
121567336
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121567336
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121567336
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121567336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EF3_N
Htt_N-HEAT_1
HEAT_EZ
PDS5
Cnd1
Adaptin_N
SCD
CLASP_N
M11L
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
121567336
NCBI-ProteinID:
XP_041733238
LinkDB
All DBs
Position
6:complement(2823714..2851096)
Genome browser
AA seq
589 aa
AA seq
DB search
MAGADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIY
DEDEVLLALAEQLGNFTMLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRKISQEHS
PVDLEVHFEPLVKRLASGDWFTSRTSACGLFSVCYPRVSSTVKAEIRQHFRTLCSDDTPM
VRRAAASKLGEFAKVLELDYVKSDIISLFTALASDEQDSVRLLAVEACVSIATLLPQEDL
ETLVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPEITKNDLVPAFQNLLKDCEAEVRS
AAAKKVKEFCENLPEDSRETIIMTHILPCVKELVSDTSQHVKSALASVIMGLSTILGKDN
TVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR
LAIIEYMPLLAGQLGVEFFDEKLNTLCMAWLIDHVYAIREAATCNLMKLVEKFGAEWAQN
TIVPKVLGMANDPNYLHRMTTLFCINALSEACGQDITTKHMLPVVIKMSNDQVANVRFNV
AKSLQKIGPVLDSNALQTEVKPVLEKLATDTDMDVKYFAQEAIRVLALA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagctgacggagacgattctctctaccccatcgccgtgctcattgacgagctt
cgtaatgaggatgtgcagctgcgactgaacagcatcaagaagctgtctaccatcgcactg
gccctgggagtggagaggacccgcactgaactcctccccttcctcacagacaccatctat
gatgaggacgaggtgcttcttgccttggctgagcagctgggcaacttcaccatgctggtg
ggaggccctgaatatgttcactgtctgctgccgcctctggagagcctggctaccgtggag
gaaacggtggtgcgagacaaggcggtggagtctctgcgtaagatctcccaggagcactct
cctgtggacctggaggtgcactttgaacccctggtgaagaggctggccagtggtgactgg
ttcacctcccgcacctccgcctgtggcctgttcagcgtctgctacccccgcgtatccagc
accgtcaaggctgaaattcgccaacatttccgcactctgtgctcagatgatactcccatg
gtgcgccgcgccgcagcctccaagcttggggaattcgccaaggttctggagctggactat
gtcaagagtgacatcatctccctcttcaccgcgctggcctccgatgagcaggactcagtg
cgcctgctggccgtggaagcctgtgtgagcatcgccacgctgctgccccaggaggacctg
gagaccctggtgatgcccaccctgcgccaggccgccgaggacaagtcctggagggtccgc
tacatggtggccgacaagttctctgagctccagaaagcagtgggcccagagatcaccaag
aacgacctggtcccagcttttcagaacctgctcaaggactgtgaggctgaggtccgatcc
gctgccgccaaaaaggtcaaggagttttgcgagaaccttccagaagacagcagagagacc
atcatcatgactcacattctgccctgtgtcaaggaactggtgtctgacaccagccagcac
gtgaagtctgccctggcctctgtcatcatgggcctgtccaccatcctgggcaaagacaac
acagtggaacacctgctgcctctgttcctggcccagctcaaggacgagtgccctgaggtg
cgcctcaacatcatctccaacctggactgtgtcaacgaggtgatcggcatccgccagctc
tcccagtcgctgctgcccgctatcgtggagctggccgaggacgccaagtggagggtccgc
ctggccatcatagagtatatgcccctgttggccggacaactgggagtggagttctttgat
gagaagctgaacacgctctgcatggcatggctcattgaccacgtatacgctatccgcgag
gcagccacctgtaacctgatgaagctggtggagaagtttggagccgagtgggcccagaac
accatcgtgcccaaggtgttgggcatggccaacgaccccaactacctgcacaggatgacc
acgctcttctgcatcaacgcactgtctgaggcctgtggccaggacatcaccactaagcat
atgctgcccgtggtcatcaagatgtccaacgaccaggtggccaatgtgcgcttcaatgtg
gccaagtccctccagaagatcggccccgtcctggacagcaatgccctgcagacagaggtg
aaaccagtcctggagaaactagccacagatacagatatggatgttaagtactttgcccag
gaagctatacgtgttctggccctggcataa
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