Coregonus clupeaformis (lake whitefish): 121567368
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Entry
121567368 CDS
T08357
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121567368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121567368
Spliceosome [BR:
cclu03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
121567368
Complex B
121567368
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
RRM_MUD2_C
xRRM
Motif
Other DBs
NCBI-GeneID:
121567368
NCBI-ProteinID:
XP_045076888
LinkDB
All DBs
Position
6
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AA seq
281 aa
AA seq
DB search
MAAPDMRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARSLKMRGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIGYAKGDSDIIAKMKGTYVERDRKKEKRAKVKGPEAA
GAKKGVPGAPVVPMGPGVPTPMPGMPPMSGAPRMMPMPGQPLYMPPPGMMPPPGMGPGGM
PPGAMPPGGMMPGQMPHAQVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP
GRHDIAFVEFDNDVQAGAAREALQGFKITQTNAMKISFAKK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgccggatatgcgcctcaaccacaccatatacatcaacaacctgaacgagaag
attaagaaagatgaactgaagaagtcgttgtatgcaattttctctcaatttggtcaaatc
ctggacattttggttgcccgctccctgaagatgaggggtcaggcctttgtcatcttcaag
gaggtcaacagcgcctccaatgccctgcgttccatgcaggggtttccattctatgacaaa
cctatgcgtattgggtacgccaaaggggactctgacatcatcgctaaaatgaagggcacc
tacgtggagcgcgaccgtaagaaggagaagagggcgaaggtcaagggcccagaggctgca
ggggccaagaagggtgtgccaggagcccctgtagtacctatgggccctggagttccaaca
cccatgcctggaatgccacccatgagcggggctcctcgtatgatgccaatgccagggcag
cccctttacatgcccccgccaggcatgatgccacctccagggatgggccctgggggaatg
ccccctggtgccatgcctccgggtgggatgatgccaggtcaaatgccccacgcccaggtc
gcagaaaaccctcccaaccacatcctgttcctcaccaacctcccagaggagaccaacgag
ctcatgctgtctatgctcttcaaccagttccctgggttcaaagaggtgcgtctggtgcca
ggtcgccacgacatcgcctttgtggagtttgataatgacgtgcaggctggagctgccagg
gaggcactacagggcttcaagatcacccagaccaacgccatgaagatctccttcgccaag
aaataa
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