Coregonus clupeaformis (lake whitefish): 121567416
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Entry
121567416 CDS
T08357
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X7
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04517
IgSF CAM signaling
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121567416
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121567416
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121567416
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121567416
Intermediate filaments
Intermediate filament-binding proteins
121567416
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
TMP_3
Motif
Other DBs
NCBI-GeneID:
121567416
NCBI-ProteinID:
XP_041733375
LinkDB
All DBs
Position
6
Genome browser
AA seq
2729 aa
AA seq
DB search
MANASTDLDNAEAQCQLNNNNTRLAGSSGHWETEVTSSKLFECSRIKALAEERDAVQKKT
FTKWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEMLPRPTRGRMRIHCLENVDKA
LQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIECDDNRETRSAKDAL
LLWCQMKTAGYSEVHIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLIRSNATYNLQQAFN
IAEQNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALRVEGKRVGKVLDNAIE
GQKMIDRYEALASELLEWIEKTIGIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEK
GNLEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWERLEKAEHERGVALRQELIRQEK
LELLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERIG
VVVELAGEMETEGYYDIRRISARKENILGQWSLLKELVVGRKARLEKNLALQKNFQDMVY
MIDWMEDMQVQLLSKDFGKHLLEVDDLLQKHSLQEADIIVQAERVQTLNTAALKFTTIEG
YQPCDPQVICNRVNHVSTCLEELKQLAAKRRSELEESQHLWAFFQEVEESEAWIREKSSI
LATQTCGKDLSSVLRLLQKHKTLAGELLARRSLLQQTMKKGKQILMEKSFGTRDIQERIM
EVKGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLLAWLQDAYRLVSSEDFGHDEYSTQ
SLLKKHRGVREAVDKHRLHVVTLRKHMVALPLHYRELNEVQSRMGEAEQLYAEVAEVAVL
RQQWLHDALAVYLMFSEVNACEVWIDEKEQWLNKMEVPERLEDVEVIAHRFESLDQEMNS
LMGRILDVNQIVQQLLDSGHPSSTEVRGCQDHLNSRWNRIVEMVEQKKDHLDSVLRLQNY
LLECAEIKSQIQEKRKAIDTTQYVGSDLGGVLALQRRLSTMEGALAVLEPKLLHLQQEAE
ELAISHPAKAMEVLEPFEGISVEWEELKRTLQGCEDSLIVAGRLQQFIQDLDCFLTWLVQ
TQTAAASDELPNALEEAERLINCHAALKEEIGRYEEDYERLQAVNELLEAEEAPLPYAAL
QQWLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAEAFLNNQESALAHIELPTT
VETVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIKERVDTLANRGNQN
RELAQQWLERLNGQWGLQRLLQDCHELGDWVAEKMLMARDTSRDETQKLHKKWLKHQAFM
AELAQNKEWLEKIEREGQQLIQEKPELSPVVRRKLGEIRECWQDLESTTQAKARQLFEAN
RADLLVQSYTSLDHRLHQLEGQLCYVDQGQDLTSVNKQLKKLQTMECQMEEWYKEVGELQ
VAAASIPQQGQVMDTVSERQAAVETRIVRLIEPLKERRRILLASKEVHQVGRDLEDEILW
VQERLPAATSQEHGSSLQAVQQLMKKNQTLQRELQGHRARVEDVLERANVIASIRSPEAD
CVRAGLEQLSRLWGLLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKG
KDEPSTLQLLKKHLALEQTIEDYAETIGLLSQQCRQLLEMGHPDSEQISKRQSQMDRLYV
SLKDLVEERKSRLEQQYWLYQLNHEVDELEQWIAEREVVASSPELGQDFEHVTILQEKFT
EFASETGSLGQERVTAVNQMVDELIDYGHAEAATIAEWKDGVNEAWADLLELMETRAQML
AASHQLHKFFADCREVLAQIDDKQRRLPEVRARQGGTANTSTLQRLMHSFEHDIQLLVTQ
VRQLQESAGQLRTIYAGQKAEAIAGREQEVMYCWKELLTSCEECRVQITTATDKLRFFGV
VRDQIMWMDSIISQIGTGDNPRDVSSVEVLMNYHQSLKSEVEARSKSVLQCVEMGKTLLA
ARNPAAEEIKEKLDTVVAKQYELSEKWDKHWEVLQHMLEVHQFAQEAVVAEAWLTAQEPF
INSKELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKMKAEQSKLPPTPLLG
RKVFLDPQETSPARSQGSPLMRRIIYEQAEPRAERPPQEPSPSYVARRLGSTVANYTPIM
NGSSSYRSSLEARTIPEMGGVVGGVVGVAASLGTAAMEARGVATNLGTTAAMEVRGVAAG
LGTASSEASGLAAGLVTPAVEAKGIAASLVTGAAAAVEVKASQYLRQPKIKHMDDMVTPM
LVACRLEKAREKEVREREQRERERDIVLMEPAPVMPVMAEVVLQEMGREGMGRERLNSEP
SSRDHRAGSSRSEPQQRDRDRDSRDSRDSHREARLERQHSSEALMIQARRDELPQEVWRE
RAERKERKLERQTSSEQEGHGHEGRRKDRHRTERQESSEHDTAKEQSDRRSTEKRSGGQT
LFDIVEQLKEREAATARGEVPKVPNGVPEKSSGRPDRPRARDRPKPRRRPRPKDPSAGEA
TTTRRSRSAPEPGMAQSVSPSVPQPPSHTAHHEGFLFRKLDIETMRKSSNRSWVNLYCVL
NKGEIGFYKDAKNTTTPYNNEPMLNLGHCHCDVTLGYKKKKNVFTLKTKDGSEFLFHAKD
EDDLKAWTTNINKSIAEHEEIAKWGQTQPTTSSTDEGTRRDGSKADNKSERGEKSDRGER
PERAERSERSDKGETKSDTKRSEKSSKKK
NT seq
8190 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcgtccacagacctggacaacgcggaggcccagtgccagctcaacaacaac
aacacccgtctggccggcagctcgggacactgggaaaccgaggtcaccagctccaaactg
tttgagtgttcccgcatcaaggccttggcagaagagagagatgctgtccagaagaagacc
ttcactaagtgggtgaactcccacctggccagagtgtcctgtcggatcgctgacctctac
aacgacctccgagacggctacatgctcaccaggctgctggaggtgctgtctggggagatg
ctgccgaggcccacgcggggtcgcatgcggatccactgcctggagaacgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggagaacgtcggctctcacgacatcgtc
gacggcaaccaccgcctcacccttggcctcatctggaccatcatccttcgcttccagatt
caggtgattaagattgagtgtgacgacaacagggagacacggtcggcaaaggacgcccta
ctactctggtgccagatgaaaaccgctgggtactctgaggtccacatccagaacttcacc
acctgctggagagatggtctcgccttcaacgcgctcattcaccgacacaggcctgatttg
attgaattccataagctgatccggtccaatgccacatacaacctccagcaagccttcaac
attgctgagcagaacctggggctcaccaaactcttggaccctgaagacgtgaatacggag
aacccagatgagaagtcgataataacctatgttgtatcctactaccattacttctccaag
atgaaagcccttcgagtagagggcaagagagtgggaaaggtgttggacaatgccattgag
ggtcagaagatgatcgatcgatatgaggctctggcctctgagctcctggagtggatcgag
aagaccataggcatcatcagcaaccagaagtttgccaactccttaacgggtgttcagcaa
cagcttcaagccttcaccacctactgcaccatcgagaagcccatcaagttccaggagaag
gggaacctggaggtgctcctctttactatccaaagcaagctcagagctaacaaccagaaa
ccatacgtgcctcatgaagggaaactcatctctgatatcaataaggcgtgggagaggctg
gagaaggcggagcatgagagaggcgtggccctacggcaggagctgattcgccaggagaag
ctggagctgctggcccagcggtttgaccacaagaccaccatgagacaggcgtggctcaac
gagaaccagcgcctcgtgtctcaggataactttggctacgacctgccagcggtggaggcc
gccatgaagaagcacgaggccattgaggcggacatctcgtcgtatgaggagcgcatcggg
gtggtggtggagctggctggagagatggagacggagggttactacgacatccggcgcatc
tcggcccgcaaggagaacatcctgggccagtggagcctgctgaaggagctggtggtgggg
aggaaggcccggctggagaagaacctggccctgcagaagaacttccaggacatggtctac
atgatcgactggatggaggacatgcaggtccagctcctttccaaagacttcggcaagcat
ctgctggaggtggacgacctgctgcagaaacacagcctccaggaagctgacatcatagtg
caggcagagagggtacagacccttaacacagccgctctcaaattcaccaccatcgaaggc
taccagccctgtgacccccaggtgatctgcaaccgggtcaaccacgtcagtacctgcctg
gaggagctcaagcagctggcggccaagcggcgctcggagctggaagagtctcagcacctc
tgggccttcttccaggaggtggaggagtccgaggcctggatccgcgagaagagctccatc
ctggccacccagacctgcggcaaggacctgagcagcgtgctgcggctgctccagaaacac
aagaccctggctggggagctgctggctcgccgctccctcctccagcagaccatgaaaaag
ggcaagcagatcctgatggagaagagcttcggcacgagggacatccaggagcgcatcatg
gaggtgaaaggggagtggaagaggctagaggaccaggcggcgcagagactcggccacctg
caggaagcactaaacttcttccagttcagcactgagacggatgacctgctggcctggctg
caggacgcctaccgcctggtgtccagcgaggactttggccacgacgagtactccacccag
tcgctgctcaagaagcaccggggtgtgcgcgaggccgtggacaagcaccggctgcatgta
gtaactctgcgcaaacacatggtggcgctgccactgcactaccgggagctgaacgaggtt
cagtcgaggatgggcgaggcggagcagctatacgccgaggtggcagaggtggccgtccta
aggcagcagtggctgcatgacgcactggccgtctacctcatgttcagcgaggtcaacgcc
tgcgaggtgtggatcgatgagaaggagcagtggctcaacaagatggaggttccagagagg
ctggaggacgtggaggtcatagcccacaggtttgagagcctggaccaggagatgaacagc
ctgatgggaaggatcctggacgtgaaccagatagtgcagcagctcctggacagtggtcac
cccagctctacagaggtcagaggctgtcaggaccacctcaacagcaggtggaaccgcatc
gtggagatggtggagcagaagaaggaccacctggactctgtactccgtctccagaactac
ctgctggagtgtgctgagatcaagtcccagatccaggagaagcgcaaggccatcgacacc
actcagtacgtgggcagtgacctgggcggggtgctggccctgcagcgccgactctccacc
atggagggggccctggctgtgctggagcccaagctgcttcacctgcagcaggaggcagag
gagctggccatctcacacccggccaaggccatggaggtcctggagcccttcgagggcatc
agtgtggagtgggaggagctgaagcgcacgctgcagggctgcgaggactccctgatcgtg
gcggggcggctgcagcagttcatccaggacctggactgcttcctgacttggctggtgcag
acgcagacggcggcagctagcgacgagctgcccaacgcgctggaggaggccgagaggctg
atcaactgccacgcggcgctgaaggaggagatcgggaggtacgaggaggactacgagcgg
ctgcaggcggtcaacgagctgctggaggccgaggaggctccgctaccctacgcagcgcta
cagcagtggctccagaagctggatgtgggctggaacaagctgctggagatgtgggagagc
cggagggaggtgctggtgcaggcgcacattttccacctcttcctgagggacgtcaagcag
gctgaggccttcctcaacaaccaggagtcagccttggctcacattgagctccccaccacg
gtggagacggtggaggctgccatcaagaagcacaaggactttaccaccaccatggagctc
aacctgcatcgcatcaaggctgtcatcgaggccggagagagcctcatcagccagagcaac
atctactcggaccgcatcaaggaacgtgtggacaccctcgctaacagaggcaaccagaac
cgggaactggcccaacagtggctggagaggctcaacggccagtgggggctccagaggtta
ctacaggactgccacgagcttggagactgggtggcagagaagatgctcatggctcgtgac
acgtcccgcgatgagacgcagaagctgcacaagaagtggctgaagcaccaggccttcatg
gccgagctggcccagaacaaggagtggctggagaagattgagagggagggccagcagttg
atccaggagaagcccgagctgagcccggtggtgcggaggaagctgggggagatccgggag
tgttggcaggacctggagagtaccacccaggccaaggcccgccagctgtttgaagctaac
cgggccgacctgctagtgcagagctacaccagcctggaccatcggctgcaccagctggag
ggacaactgtgctacgtggaccagggtcaggacctgaccagtgtcaacaagcagctcaag
aagctccagacgatggagtgtcagatggaggagtggtataaggaggtgggggagctgcag
gtggcggcagcctccatcccccagcagggccaggtcatggacacggtcagcgagcgccag
gccgccgtggagacgcgcatcgtccgcctcatcgagccgctcaaggagcgccggcgcatc
cttctggcctccaaggaggtgcaccaagtgggccgggacctggaggacgagatactgtgg
gtgcaggagcggctgcctgccgccacctctcaggagcacggctccagtctacaagctgtg
cagcagctcatgaagaagaaccagactctgcagagggagctgcagggccatcgggcgagg
gtggaggacgtcctggaacgagctaatgtcatcgcctccatccgcagccccgaggctgac
tgtgtgcgggcgggcctggagcagctcagcaggctgtggggcctgctgtgggccgagaca
gagagaagacagctggtgctggatgccatgtaccaggcccagcagtactactttgacacg
gctgaggtggaggcctggctcagcgaacaggagctgcacatgatgaacgaggaaaagggc
aaggatgagcccagcaccctgcagctactgaagaagcacctggcactggagcagacgata
gaggactacgctgagacgataggccttctctcccagcagtgcagacagctactggagatg
ggacatccagacagtgagcagatcagtaagcgccagtctcagatggaccggctgtacgtg
tctctcaaggacctggtggaggagaggaagtctcgtctggagcagcagtactggctctac
cagctcaaccacgaggtggacgagctggagcagtggatcgctgagagggaggtggtggcc
agctcgccagaactgggacaggactttgaacacgtcacgatcctgcaggagaagttcaca
gagtttgcgtcggagacaggcagtctgggtcaggagcgcgtgacagcggttaaccagatg
gtggatgagctgatcgactatggccacgccgaggccgccaccatcgccgagtggaaggac
ggtgtgaacgaggcctgggccgacctcctagagctcatggagacccgggcacagatgctg
gccgcctcgcaccagctccacaagttcttcgccgactgccgcgaggtcttggcccaaatc
gatgataagcagcggaggctgcctgaggtgcgggcgcgccagggtggcactgccaacacc
agcaccctgcagaggctcatgcacagcttcgagcacgacatccagctgctcgtcactcag
gtgaggcagctccaggagagtgcgggtcagctcaggaccatctatgccggtcagaaggct
gaggccatcgccggccgggaacaggaagtgatgtattgctggaaggagctcttgacttcc
tgtgaggagtgccgggtgcagatcaccacggcaacagacaagctgcggttcttcggggtc
gtgcgagaccagatcatgtggatggacagcatcatctctcagatcggcacaggggacaat
ccaagggatgtgtcctcagtggaggtactgatgaactaccaccagagcttgaagagcgag
gtggaggcgcgcagtaagagtgtgctgcagtgcgtcgagatgggcaagacgctgctggcc
gcgcgcaaccctgctgctgaggagatcaaggagaagctggatacggtggtggccaagcag
tacgagctgtctgagaaatgggacaaacactgggaggtcctgcagcacatgctggaggtg
caccagtttgcccaggaagcggtggtggccgaggcctggctcactgcccaggaacccttc
atcaacagcaaggagttgggcgccagcgtggacgaggtggagcagctcatccgtcgccac
gaggccttccgcaaggccgccgccacctgggaggagcgcttcagctcgctacgacgcctc
actacggtggagaaaatgaaagcagagcagagtaagctccctcccacccccctgctgggt
cgtaaggtgttcctggacccccaggagacgtcccctgcccggagccagggctcccccctg
atgagacggatcatttacgagcaggccgagcccagagccgaaaggcccccccaggaaccc
tcgccatcctacgtggcccgccgcttgggctccaccgtggccaactacacccccatcatg
aacggctccagtagctaccgcagcagcctggaggcccggaccatccctgagatgggggga
gtggttgggggtgtagtgggggtggcagccagccttggaacagccgctatggaggccaga
ggggtggcaacaaatttagggaccaccgcagccatggaggtccgaggggtggcagcaggg
ttggggactgcctcctcggaagccagtgggttggcagcaggattggtcacccccgcggtc
gaggccaaagggatagctgcaagcttggtgactggtgcagccgccgcagtggaggtgaaa
gcctcgcagtacctccggcagcctaagatcaaacacatggacgacatggtgacgcccatg
cttgtggcctgtaggctggagaaggcgagagagaaggaggtgagagagagggagcagaga
gagagggagagagatattgtgttaatggagcccgcgccggtgatgccggtgatggctgag
gtggtgctccaggagatggggagggaggggatgggtagggagaggttgaacagcgagccc
agcagcagagaccaccgggcggggagcagccggtcagagccccagcagagagacagggac
agagacagtagggacagtagggacagtcacagggaagccaggctggagcgccagcactct
agtgaggcgctgatgatccaggcgcgacgggatgagctgccccaggaggtgtggcgggaa
cgggccgagcgcaaagagaggaagctggagaggcagacgtccagcgagcaggagggccac
ggacacgagggccggaggaaagaccgccaccggacggagagacaggagtccagtgaacac
gacacagccaaggagcagtcagacagacgttctacggagaaaaggtcaggcggccagacc
ttgtttgacatagtggagcaactgaaagagagagaggcagcaacggcccgaggggaggtc
cctaaagtgccgaacggtgtgccagagaagtcttctggacgtccagaccggccgcgagca
cgggaccgccccaagccccggcggagaccccggcccaaggacccctctgcaggagaggcc
accaccacccggcggtcacgctcggcaccagagccagggatggcccagagcgtgagcccc
tccgtcccccagccgcccagccacacagcccaccacgagggcttcctcttccgcaagctg
gacatcgagaccatgaggaagagctctaacagatcctgggtcaacctgtactgtgtgctg
aacaaaggagagataggcttctataaggatgctaagaacaccaccacaccttacaacaac
gagcccatgctcaacctcggccactgccactgcgacgtcacccttggatacaagaagaag
aaaaacgtctttacacttaaaacgaaagacggaagtgaatttctgttccatgcaaaggat
gaggatgatctaaaggcctggaccaccaacatcaacaagagcatcgcagagcatgaggag
attgccaaatggggtcagacccagcctactacctcatccacggacgagggcacgcgccgc
gacggcagcaaggccgataacaagtcagagcggggagaaaagtcagaccggggggaaagg
ccggagagggccgagcgctctgagaggtcagataagggtgagaccaaatcggacaccaag
cgttcagaaaagtccagcaagaagaaatga
DBGET
integrated database retrieval system
