Coregonus clupeaformis (lake whitefish): 121567422
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Entry
121567422 CDS
T08357
Name
(RefSeq) RNA-binding protein Nova-1-like isoform X1
KO
K14944
RNA-binding protein Nova
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121567422
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121567422
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
121567422
NCBI-ProteinID:
XP_041733385
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Position
6:complement(45002921..45056750)
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AA seq
523 aa
AA seq
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MMAGGAVQQNGIFLNPHHHNQQPHMESDPPDSRKRPLETPTEASSTKRTNTGVAFLQPLF
ETEGIVFPHQESHSEAHEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS
KDFYPGTTERVCLIQGTVEALNGVHNFIADKVREMPQSTQKSEPVSVLQPQTTVNPDRIK
QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRK
AVEIIVQKIQEDPQSSSCLNISYSNISGPVANSNPTGSPYANSAEVNPAAAAAAAATASS
LLGQATMQSMGGFPTSMGPSFSGNDLLTITSALNTLASYGYNTNSLGLGLNPAAASGVLA
AVAASANPAAAAAANLLASYASDASTSASHQAASMGGFTLGSLAAATGATNGYLSASSPL
MAQSLMVTEKQMQEGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFI
PGTRNRKVTITGSQASTQAAQYLISQRITYEQGVRATNPQKVG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgatggccggcggggcagtacagcaaaacgggattttcctgaatcctcatcatcacaat
caacagccgcacatggagtcggatccccccgattcgcgtaaaagaccactggagacccca
accgaggctagcagcactaaacgcacaaacacgggagtggccttcctgcagccccttttt
gaaactgaaggcattgtattccctcaccaggaatcacactctgaggcacatgaggaaggt
gagtacttcctaaaggtgctgatccccagctatgcagccggctccatcatcggcaaggga
ggacagaccatcgtccagctgcagaaagagaccggcgccaccatcaaactgtccaaatcc
aaagacttctaccctggtacgacagagcgggtgtgtctgatccaggggacagtggaggct
ctgaatggagtccataacttcatcgctgacaaggtgcgggagatgccgcagagcacccag
aaatcagagccggtcagtgtactgcagccacagaccaccgtcaaccctgaccgcatcaaa
caggccaagctgatagtaccaaacagcacagcaggtctgatcattggtaaaggtggagcc
acagtcaaggccgtcatggagcagtcgggcgcctgggtgcagctctctcaaaaacctgag
ggcatcaacctgcaggagcgtgtggtcaccattagcggagagcccgagcagaaccgtaaa
gccgtggagatcatcgttcagaagatccaggaggacccccagagcagcagctgcctcaac
atcagctactccaacatctctggccctgtggccaactccaaccccaccggctccccctac
gccaactcagccgaggtgaaccccgctgctgctgctgccgccgctgccacagcttccagc
ctcctgggtcaggccaccatgcagagtatgggcggcttccccaccagcatgggtcccagc
ttctctggcaacgacctcctgaccattacctcggccctcaacacattagccagctatggc
tacaacaccaactccctgggcctggggctcaaccccgccgcagcctcgggagtcctggcc
gccgtagcggctagcgctaaccccgccgcggctgccgctgctaacctcctggcatcctac
gccagcgatgcctccaccagcgcaagccaccaggccgcctccatgggaggcttcaccctg
ggctcgctggccgcggctacgggggccaccaacggctacctgagcgcctcgtccccgctg
atggcacaatccctgatggtcactgagaagcagatgcaggagggggccaaggacgtggtg
gagatcgctgttcccgaaaacctggtaggagccatcttggggaaaggagggaaaacgcta
gtggagtaccaggagctgaccggagcccggatccagatctccaaaaagggagagttcatt
cccggcacccggaaccgtaaagttaccataaccggatctcaggcgtcaacgcaggcagct
cagtatctgatcagccaacggatcacgtatgagcagggtgtgcgcgccaccaacccacag
aaggtgggctag
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