Coregonus clupeaformis (lake whitefish): 121567441
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Entry
121567441 CDS
T08357
Symbol
wdr90
Name
(RefSeq) WD repeat-containing protein 90
KO
K24759
WD repeat-containing protein 90
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121567441 (wdr90)
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121567441 (wdr90)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
WD40_Prp19
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
WD40_MABP1-WDR62_1st
EIF3I
CFA20_dom
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_SPT8
NBCH_WD40
Beta-prop_NWD2_C
Cytochrom_D1
WDR54
Motif
Other DBs
NCBI-GeneID:
121567441
NCBI-ProteinID:
XP_041733420
LinkDB
All DBs
Position
1:35372678..35438393
Genome browser
AA seq
1868 aa
AA seq
DB search
MTSRVWQHPYVNIFKHMRVEEWKKTSREGDVTTYMDKTLMCSVFRIRGSIPASNYILLPK
TSTQSLGLTGRYLYLLFRPSPTKHFVVHLDIAAEEGQVIRVSFSNLFKEFKSTATWLHFP
FLCGAAKGSVYESTAKTARHDLVGPAPSTVRWTCLMMDLQYVLSVYLNRRHSHLKTIKLC
ANMSVKNMFTSDLVLDPGVSFNEAKQAGLASSLGTGPMPREMSFPVPKGGSWHDLYDYIR
FPSDGAKMPFDSIQKGYPCPVSTCSPAERSPMREMSRSVNISKSVQDRVSLIQQITTPKL
HPRHRTTLVTSSIPELGVVTSGLNGQDTSQDDWNYHGDNLERGQGSRTSRSHRSVVRIPF
TDDGGVHVYAHTEDDINTHREDSDVEEIVCTAVSRPVTLPSAKESQQRKLHPDPILRLNR
IIGFGGATMKCALWTKSGDTVVYPCHAIIVSMKISSGQQRFFIGHTDKVSALTFNGNSTV
LASAQTGIQSVVRVWNYLKANCLAMFKTHAHSLSSLSFSYSGGVLCGVGKDGHSKTMVVV
WNTLRVTKGGEVSVLAKAHTDVDIQTMKIAFFDDTRMVSCGRDNIRLWRVRNGALRSCPV
NLGEYHALDFTDVAFEEGHSADREPEDRTLFASSRSGHILEIDYGSVAIKNVRRLLPAQQ
PHAQRREKQTFSMGMGIAVNSISVSSAFCATGSEDGFLRLWPLDFSTVFLEAEHEGPVSL
VSVSDDGLSVMAATSSGNLGYLDVSSRGYSTLMRSHTDGVLGFSVDGIRRRITTASCDRT
VRVWDMDSMQQLYDFVSEDTPCSVAFHPSLQVFCCGSSSGLVRVFDIASAKLLAEHKQHR
GEVVGLAFSPDGEFMYSAGSLGALALYNSSQEDHHVLRVLGNVVARGTDRAPDALTVSSD
NRCLAFVGPSEYTVTIMDARSLDELLRVDVSILDVESTSLDSALKVCFSPASTGHLLVTT
SANKILWISANTGRLLREVSKAHKHQCSSLAVSEDGRFLLTAGHNAVKVWDYSMQLDVNS
QMFIGHSQPIHQVNFSPDQMAVVSVGDAIFFWDFLAHPQEAGTDRRSPPKAASVSPPKPA
PKGHSESEVSSRLLSNGMPRRTAPLPSSPLPCLDISSIDRIGQEALGRLSLCEEDTDEVL
PSPAPAGPSPRPASGSFLKVTEMVAGGVSSSTLKASLKRAADNDDLEVVKPVRPDCYKHF
TPRFKTSTLDQSTATPQPGEEGLSLKAVIGYNGNGRANMVWNPETGLFAYSCGCVVVVEN
LHTGSQRHWLGHTEEISSLAVTNDAQTVASAAGGSGGSRSLICIWNVQDGTCSNTISYHR
GAVQALAFSRDDFFFLTVGDFTDPEVALWSTRTYQLLSRVSVSGPLHDVAFSPSAASQLA
CVGSQGLYFCNTHTQGLDVELKVQRVCVPEELGDVEPTALCYNANSILFTGTNSGHVCAW
DCNTQRCFMTWEADQGEIGVLLCRGNRLLTGSNTRRLRLWGVAAVQSMRPGGEASNTEDR
GALVLLEQEMMLDGTVVCAAFDDVMDMGIVGTTAGTLWYINWVDNTSIRLISGHKSKVND
VVFSPDESHFATCGEDGSVRVWSAPSNELVVQFQVLNQSCGSACWSPVVSPSKGGACVVG
GYSDGTLRIFHLASSEMELKLHPHPVAITAIQYSANGQVILSAGRDGLMAVSNPVTGVTV
RIISDHKGAPITTIQCVKKQYKEFGLEGNEMWLAASTDRRVSVWAADWMKDKCELLDWLT
FPAPANPEESDSLPPSLAAFSPIDPGLVVYTGYGVERELSFYSLAKKRVIKKIALSHWAM
CFSLSSKGRLIAVGSKERVLKLIKSSSGRFQDFLHHSDSLQTCRFSPSGKLLFTVAYNEI
LLWEVHGL
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgagagtgtggcaacacccctatgtcaacatcttcaaacacatgagagttgag
gaatggaagaagacatcaagagagggagacgtgacaacctatatggacaaaacactaatg
tgttcagtgtttcggatccgggggtccattccagccagcaattacatccttctgcccaag
accagcactcagtccctggggctaacaggacgctacctctacctgctcttcagacccagt
cctaccaaacactttgtggtgcatttggacatcgctgctgaggagggccaggtgattcgt
gtctccttctccaacctgtttaaggagttcaagtccacagccacctggctgcacttcccc
ttcctgtgtggagcggccaagggctcggtgtacgagagcaccgcaaaaacagccagacac
gatctggtgggtcccgccccctctacggtgcgttggacctgtctgatgatggacctgcag
tacgttctctctgtctacctcaaccgccgccacagccacctgaagacaatcaaactgtgt
gccaacatgtcagtgaaaaacatgttcaccagtgacctggtgctagaccctggagtgtcc
ttcaacgaggcaaagcaggccgggttggcgtcatctctgggcacaggccccatgcccagg
gagatgtccttccctgtgcccaagggaggcagctggcatgacctctacgactacatcagg
tttccatcagacggagccaagatgccctttgactccattcagaaaggctatccctgccct
gtgtctacatgttccccagcagagaggagtcccatgagagagatgtctcgtagtgtgaac
atcagcaaatcagtgcaggacagagtgtccctcatccagcagatcaccacccccaaacta
cacccgaggcatcgcaccactctggtgacgtccagtattcctgagctgggagtggtcaca
tccggcctgaacggccaagacacgtcacaggacgactggaattaccatggcgacaacctg
gaaagaggtcaggggtcgaggacctccaggtcgcaccgctctgttgtcaggatcccattc
acggatgatgggggcgtgcacgtgtacgcacacaccgaggatgacatcaacacccacaga
gaggacagcgacgtagaggagattgtgtgtacagcagtctcaagacctgtcactcttccc
tcagccaaggaatcccaacagcggaagctgcaccctgaccccatcctcaggctcaacaga
atcattggtttcgggggagccactatgaaatgtgctctatggactaagtctggtgatacg
gtggtgtatccctgtcacgccatcatcgtctccatgaagatctcctccggacagcagagg
ttcttcatcggccacactgataaggtgtctgctctcacgttcaatgggaacagcacagtg
ctggcctcggcccagaccggcattcagagtgtggtgcgggtgtggaactacctcaaggcc
aactgcttggccatgttcaagacccacgctcactcactgtcctcgctgagcttctcctac
agcggtggggttctgtgtggagtggggaaagacggccacagtaaaacaatggtggttgtg
tggaacaccctgcgtgtcactaaaggaggagaggtgtctgtcctggccaaagcacacacc
gatgtggacatacagaccatgaagattgccttctttgatgacacacggatggtgtcctgt
ggtcgagataacatccggttgtggcgcgtgcggaacggggccctgcggtcgtgtccggtc
aacctgggggagtaccacgccctggacttcaccgacgtggcctttgaggagggtcactct
gctgaccgcgagcctgaggaccgcacactatttgccagtagccgcagcggccacatcctg
gagatagactacgggagtgtggcgatcaagaacgtcaggagactgctgcccgcccagcag
ccccacgctcagcgccgggagaaacagacctttagcatgggtatgggcatcgctgtcaac
agcatcagcgtgtcatcagcgttctgcgccacaggctcggaggacggctttctgcggctc
tggcccctggacttctccaccgtgttcctggaggctgaacatgagggtcctgtgagcctt
gtgtccgtgtccgacgacggcctcagcgtcatggcggccacctccagcggtaacctgggc
tacctggacgtgagcagccgcggctacagcaccctgatgaggtcacacacggacggcgtg
ctgggcttcagcgtggacggtatccgtcggcgcatcaccaccgcctcttgcgaccgcacc
gtgcgcgtctgggacatggactccatgcagcagctgtatgactttgtttctgaagacacc
ccctgctccgtggccttccaccccagcctgcaagtcttctgctgtggatccagctctggc
cttgtcagggtctttgacatcgccagcgccaaactactggcagaacacaagcagcacaga
ggggaggtggtgggcctggccttctctccagatggagagtttatgtacagcgctggctcc
ctgggtgctctggctctctacaactcctctcaggaagatcaccatgtactccgagtacta
ggtaacgtggtggcgcgaggcactgatcgtgctcctgatgccctcacagtaagcagtgac
aatcgctgtctggccttcgtcgggccgtctgagtacaccgtcaccatcatggacgcccgc
tcactggatgagctgctgcgtgtggacgtgagtatcctggatgtggagagcaccagtctg
gactcggccctgaaggtgtgtttctccccggcctccaccggacacctactggtcaccacc
tccgccaacaagattctgtggattagcgctaacaccggacgactgctcagagaggtgtct
aaggcacataagcaccagtgttcctctctggcagtgagtgaggatggacgtttcttactg
acagcaggacacaatgctgtgaaggtgtgggattacagcatgcagctggatgtcaactca
cagatgttcataggacacagccagcctattcaccaggtgaacttctccccagaccagatg
gccgtggtctcagtaggagacgccatcttcttctgggacttcctggcccaccctcaggag
gctggaactgacagacgttcaccaccaaaggcagcctctgtttcgcctcctaaaccagcc
cctaaaggtcattcagagtcagaggtcagcagcaggctgctctccaatggaatgcctcga
cggacagcgccccttccctcctcacccctgccctgtttggacattagctccatagacagg
attggacaagaagctctgggacgcctgtctctgtgtgaggaggatactgacgaggttctt
cccagccctgccccggcaggcccctcccctcgccctgcgtctggctcctttctcaaagtc
actgagatggtggcgggcggagtctcttcatcaaccctgaaggccagtctgaagagagca
gcagacaatgatgatttggaggtggtgaagccagtgcgtcccgactgctacaagcacttc
accccacgtttcaaaacctccacccttgaccagagtactgcaactccccaaccgggcgaa
gagggcctgagtctgaaagcggtgattggttacaatggcaatgggcgggccaacatggtg
tggaatccagaaacaggtctgtttgcgtactcctgtggttgtgtggtggtggtggagaac
ctacacactggctcccagagacactggctgggccacactgaggagatctcctctctggct
gttaccaatgacgcacagacggtggcctcggcagcagggggcagcggtggctccaggagc
ctcatctgcatctggaacgtacaggacggaacctgcagtaataccatatcctaccaccgg
ggggcagtgcaggccctggccttctccagggatgatttcttcttcctcactgtgggggat
ttcaccgacccggaggtggcgctgtggagcaccaggacctaccagctgctgtccagggtc
agtgtgtccggcccgctccacgatgtggccttcagcccctctgcagccagccagctggcc
tgtgtgggcagccagggactctacttctgcaacacccacacacagggcctggacgtggag
ctcaaggtgcagagagtgtgtgtgccagaggagttgggtgacgtggagccgacggctctg
tgctacaacgccaactccatcctcttcacgggaaccaacagtggacatgtgtgtgcctgg
gactgcaacacccagcgttgcttcatgacctgggaggctgaccagggggagataggagtg
ttgctgtgtcgggggaaccgtctgctgacgggcagtaacactcgcaggctgaggctgtgg
ggcgtggcagctgtacagagcatgaggcctggaggagaggcctccaacacagaggacaga
ggcgctctggtgctattggagcaggagatgatgctggacgggacggtggtgtgcgcggcc
tttgatgacgtcatggacatgggcatcgtgggcaccacagcgggcaccctgtggtacatc
aactgggtggacaacaccagcatccgcctcatcagcgggcacaagagcaaggtaaatgac
gtggtgttcagcccagacgagagccactttgccacctgtggggaggacggcagtgtgagg
gtgtggtcggcccccagcaacgagctggtggtgcagtttcaggtgctcaaccagagctgt
ggtagtgcgtgctggagcccagtcgtcagtccctctaaagggggtgcgtgtgtggtgggg
gggtacagcgacgggaccctaaggatctttcacctggcctcctcagagatggagctcaag
ctgcacccgcaccctgtggccatcaccgccatccagtactccgctaacggtcaggtgatc
ctctctgcggggagggacggcctgatggctgtcagcaacccagtgaccggggttaccgtc
cgtatcatcagcgaccacaagggggcgcccatcactaccatccagtgtgtgaagaaacag
tacaaagaatttgggcttgaaggaaacgagatgtggttggctgccagtacagacagacgg
gtcagcgtttgggcagctgattggatgaaggacaagtgtgagctcctggattggctcaca
tttccagcccccgccaatcctgaggagtcagacagccttcctcccagcctggctgctttc
agccccatagaccctggcctggtggtgtacacaggctatggagtggagagagagctgtcc
ttctacagcctggccaagaaacgggtcataaagaagattgccctgtcccattgggccatg
tgcttcagcctctcctccaagggtcgcctcatagcagtgggctcaaaagagcgagtgctg
aagctcatcaaatcatccagcggtaggttccaggacttcctccaccacagtgactctttg
cagacctgtcgattctccccctcagggaaactcctcttcaccgtcgcctacaacgagatc
ctgctgtgggaggtgcatggcctgtag
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