KEGG   Coregonus clupeaformis (lake whitefish): 121567441
Entry
121567441         CDS       T08357                                 
Symbol
wdr90
Name
(RefSeq) WD repeat-containing protein 90
  KO
K24759  WD repeat-containing protein 90
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cclu03037]
    121567441 (wdr90)
Cilium and associated proteins [BR:cclu03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   121567441 (wdr90)
SSDB
Motif
Pfam: WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd WD40_Prp19 Beta-prop_EML WD40_CDC20-Fz Beta-prop_EML_2 WD40 WD40_WDHD1_1st WDR55 WD40_MABP1-WDR62_1st EIF3I CFA20_dom Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_SPT8 NBCH_WD40 Beta-prop_NWD2_C Cytochrom_D1 WDR54
Other DBs
NCBI-GeneID: 121567441
NCBI-ProteinID: XP_041733420
LinkDB
Position
1:35372678..35438393
AA seq 1868 aa
MTSRVWQHPYVNIFKHMRVEEWKKTSREGDVTTYMDKTLMCSVFRIRGSIPASNYILLPK
TSTQSLGLTGRYLYLLFRPSPTKHFVVHLDIAAEEGQVIRVSFSNLFKEFKSTATWLHFP
FLCGAAKGSVYESTAKTARHDLVGPAPSTVRWTCLMMDLQYVLSVYLNRRHSHLKTIKLC
ANMSVKNMFTSDLVLDPGVSFNEAKQAGLASSLGTGPMPREMSFPVPKGGSWHDLYDYIR
FPSDGAKMPFDSIQKGYPCPVSTCSPAERSPMREMSRSVNISKSVQDRVSLIQQITTPKL
HPRHRTTLVTSSIPELGVVTSGLNGQDTSQDDWNYHGDNLERGQGSRTSRSHRSVVRIPF
TDDGGVHVYAHTEDDINTHREDSDVEEIVCTAVSRPVTLPSAKESQQRKLHPDPILRLNR
IIGFGGATMKCALWTKSGDTVVYPCHAIIVSMKISSGQQRFFIGHTDKVSALTFNGNSTV
LASAQTGIQSVVRVWNYLKANCLAMFKTHAHSLSSLSFSYSGGVLCGVGKDGHSKTMVVV
WNTLRVTKGGEVSVLAKAHTDVDIQTMKIAFFDDTRMVSCGRDNIRLWRVRNGALRSCPV
NLGEYHALDFTDVAFEEGHSADREPEDRTLFASSRSGHILEIDYGSVAIKNVRRLLPAQQ
PHAQRREKQTFSMGMGIAVNSISVSSAFCATGSEDGFLRLWPLDFSTVFLEAEHEGPVSL
VSVSDDGLSVMAATSSGNLGYLDVSSRGYSTLMRSHTDGVLGFSVDGIRRRITTASCDRT
VRVWDMDSMQQLYDFVSEDTPCSVAFHPSLQVFCCGSSSGLVRVFDIASAKLLAEHKQHR
GEVVGLAFSPDGEFMYSAGSLGALALYNSSQEDHHVLRVLGNVVARGTDRAPDALTVSSD
NRCLAFVGPSEYTVTIMDARSLDELLRVDVSILDVESTSLDSALKVCFSPASTGHLLVTT
SANKILWISANTGRLLREVSKAHKHQCSSLAVSEDGRFLLTAGHNAVKVWDYSMQLDVNS
QMFIGHSQPIHQVNFSPDQMAVVSVGDAIFFWDFLAHPQEAGTDRRSPPKAASVSPPKPA
PKGHSESEVSSRLLSNGMPRRTAPLPSSPLPCLDISSIDRIGQEALGRLSLCEEDTDEVL
PSPAPAGPSPRPASGSFLKVTEMVAGGVSSSTLKASLKRAADNDDLEVVKPVRPDCYKHF
TPRFKTSTLDQSTATPQPGEEGLSLKAVIGYNGNGRANMVWNPETGLFAYSCGCVVVVEN
LHTGSQRHWLGHTEEISSLAVTNDAQTVASAAGGSGGSRSLICIWNVQDGTCSNTISYHR
GAVQALAFSRDDFFFLTVGDFTDPEVALWSTRTYQLLSRVSVSGPLHDVAFSPSAASQLA
CVGSQGLYFCNTHTQGLDVELKVQRVCVPEELGDVEPTALCYNANSILFTGTNSGHVCAW
DCNTQRCFMTWEADQGEIGVLLCRGNRLLTGSNTRRLRLWGVAAVQSMRPGGEASNTEDR
GALVLLEQEMMLDGTVVCAAFDDVMDMGIVGTTAGTLWYINWVDNTSIRLISGHKSKVND
VVFSPDESHFATCGEDGSVRVWSAPSNELVVQFQVLNQSCGSACWSPVVSPSKGGACVVG
GYSDGTLRIFHLASSEMELKLHPHPVAITAIQYSANGQVILSAGRDGLMAVSNPVTGVTV
RIISDHKGAPITTIQCVKKQYKEFGLEGNEMWLAASTDRRVSVWAADWMKDKCELLDWLT
FPAPANPEESDSLPPSLAAFSPIDPGLVVYTGYGVERELSFYSLAKKRVIKKIALSHWAM
CFSLSSKGRLIAVGSKERVLKLIKSSSGRFQDFLHHSDSLQTCRFSPSGKLLFTVAYNEI
LLWEVHGL
NT seq 5607 nt   +upstreamnt  +downstreamnt
atgacgtcgagagtgtggcaacacccctatgtcaacatcttcaaacacatgagagttgag
gaatggaagaagacatcaagagagggagacgtgacaacctatatggacaaaacactaatg
tgttcagtgtttcggatccgggggtccattccagccagcaattacatccttctgcccaag
accagcactcagtccctggggctaacaggacgctacctctacctgctcttcagacccagt
cctaccaaacactttgtggtgcatttggacatcgctgctgaggagggccaggtgattcgt
gtctccttctccaacctgtttaaggagttcaagtccacagccacctggctgcacttcccc
ttcctgtgtggagcggccaagggctcggtgtacgagagcaccgcaaaaacagccagacac
gatctggtgggtcccgccccctctacggtgcgttggacctgtctgatgatggacctgcag
tacgttctctctgtctacctcaaccgccgccacagccacctgaagacaatcaaactgtgt
gccaacatgtcagtgaaaaacatgttcaccagtgacctggtgctagaccctggagtgtcc
ttcaacgaggcaaagcaggccgggttggcgtcatctctgggcacaggccccatgcccagg
gagatgtccttccctgtgcccaagggaggcagctggcatgacctctacgactacatcagg
tttccatcagacggagccaagatgccctttgactccattcagaaaggctatccctgccct
gtgtctacatgttccccagcagagaggagtcccatgagagagatgtctcgtagtgtgaac
atcagcaaatcagtgcaggacagagtgtccctcatccagcagatcaccacccccaaacta
cacccgaggcatcgcaccactctggtgacgtccagtattcctgagctgggagtggtcaca
tccggcctgaacggccaagacacgtcacaggacgactggaattaccatggcgacaacctg
gaaagaggtcaggggtcgaggacctccaggtcgcaccgctctgttgtcaggatcccattc
acggatgatgggggcgtgcacgtgtacgcacacaccgaggatgacatcaacacccacaga
gaggacagcgacgtagaggagattgtgtgtacagcagtctcaagacctgtcactcttccc
tcagccaaggaatcccaacagcggaagctgcaccctgaccccatcctcaggctcaacaga
atcattggtttcgggggagccactatgaaatgtgctctatggactaagtctggtgatacg
gtggtgtatccctgtcacgccatcatcgtctccatgaagatctcctccggacagcagagg
ttcttcatcggccacactgataaggtgtctgctctcacgttcaatgggaacagcacagtg
ctggcctcggcccagaccggcattcagagtgtggtgcgggtgtggaactacctcaaggcc
aactgcttggccatgttcaagacccacgctcactcactgtcctcgctgagcttctcctac
agcggtggggttctgtgtggagtggggaaagacggccacagtaaaacaatggtggttgtg
tggaacaccctgcgtgtcactaaaggaggagaggtgtctgtcctggccaaagcacacacc
gatgtggacatacagaccatgaagattgccttctttgatgacacacggatggtgtcctgt
ggtcgagataacatccggttgtggcgcgtgcggaacggggccctgcggtcgtgtccggtc
aacctgggggagtaccacgccctggacttcaccgacgtggcctttgaggagggtcactct
gctgaccgcgagcctgaggaccgcacactatttgccagtagccgcagcggccacatcctg
gagatagactacgggagtgtggcgatcaagaacgtcaggagactgctgcccgcccagcag
ccccacgctcagcgccgggagaaacagacctttagcatgggtatgggcatcgctgtcaac
agcatcagcgtgtcatcagcgttctgcgccacaggctcggaggacggctttctgcggctc
tggcccctggacttctccaccgtgttcctggaggctgaacatgagggtcctgtgagcctt
gtgtccgtgtccgacgacggcctcagcgtcatggcggccacctccagcggtaacctgggc
tacctggacgtgagcagccgcggctacagcaccctgatgaggtcacacacggacggcgtg
ctgggcttcagcgtggacggtatccgtcggcgcatcaccaccgcctcttgcgaccgcacc
gtgcgcgtctgggacatggactccatgcagcagctgtatgactttgtttctgaagacacc
ccctgctccgtggccttccaccccagcctgcaagtcttctgctgtggatccagctctggc
cttgtcagggtctttgacatcgccagcgccaaactactggcagaacacaagcagcacaga
ggggaggtggtgggcctggccttctctccagatggagagtttatgtacagcgctggctcc
ctgggtgctctggctctctacaactcctctcaggaagatcaccatgtactccgagtacta
ggtaacgtggtggcgcgaggcactgatcgtgctcctgatgccctcacagtaagcagtgac
aatcgctgtctggccttcgtcgggccgtctgagtacaccgtcaccatcatggacgcccgc
tcactggatgagctgctgcgtgtggacgtgagtatcctggatgtggagagcaccagtctg
gactcggccctgaaggtgtgtttctccccggcctccaccggacacctactggtcaccacc
tccgccaacaagattctgtggattagcgctaacaccggacgactgctcagagaggtgtct
aaggcacataagcaccagtgttcctctctggcagtgagtgaggatggacgtttcttactg
acagcaggacacaatgctgtgaaggtgtgggattacagcatgcagctggatgtcaactca
cagatgttcataggacacagccagcctattcaccaggtgaacttctccccagaccagatg
gccgtggtctcagtaggagacgccatcttcttctgggacttcctggcccaccctcaggag
gctggaactgacagacgttcaccaccaaaggcagcctctgtttcgcctcctaaaccagcc
cctaaaggtcattcagagtcagaggtcagcagcaggctgctctccaatggaatgcctcga
cggacagcgccccttccctcctcacccctgccctgtttggacattagctccatagacagg
attggacaagaagctctgggacgcctgtctctgtgtgaggaggatactgacgaggttctt
cccagccctgccccggcaggcccctcccctcgccctgcgtctggctcctttctcaaagtc
actgagatggtggcgggcggagtctcttcatcaaccctgaaggccagtctgaagagagca
gcagacaatgatgatttggaggtggtgaagccagtgcgtcccgactgctacaagcacttc
accccacgtttcaaaacctccacccttgaccagagtactgcaactccccaaccgggcgaa
gagggcctgagtctgaaagcggtgattggttacaatggcaatgggcgggccaacatggtg
tggaatccagaaacaggtctgtttgcgtactcctgtggttgtgtggtggtggtggagaac
ctacacactggctcccagagacactggctgggccacactgaggagatctcctctctggct
gttaccaatgacgcacagacggtggcctcggcagcagggggcagcggtggctccaggagc
ctcatctgcatctggaacgtacaggacggaacctgcagtaataccatatcctaccaccgg
ggggcagtgcaggccctggccttctccagggatgatttcttcttcctcactgtgggggat
ttcaccgacccggaggtggcgctgtggagcaccaggacctaccagctgctgtccagggtc
agtgtgtccggcccgctccacgatgtggccttcagcccctctgcagccagccagctggcc
tgtgtgggcagccagggactctacttctgcaacacccacacacagggcctggacgtggag
ctcaaggtgcagagagtgtgtgtgccagaggagttgggtgacgtggagccgacggctctg
tgctacaacgccaactccatcctcttcacgggaaccaacagtggacatgtgtgtgcctgg
gactgcaacacccagcgttgcttcatgacctgggaggctgaccagggggagataggagtg
ttgctgtgtcgggggaaccgtctgctgacgggcagtaacactcgcaggctgaggctgtgg
ggcgtggcagctgtacagagcatgaggcctggaggagaggcctccaacacagaggacaga
ggcgctctggtgctattggagcaggagatgatgctggacgggacggtggtgtgcgcggcc
tttgatgacgtcatggacatgggcatcgtgggcaccacagcgggcaccctgtggtacatc
aactgggtggacaacaccagcatccgcctcatcagcgggcacaagagcaaggtaaatgac
gtggtgttcagcccagacgagagccactttgccacctgtggggaggacggcagtgtgagg
gtgtggtcggcccccagcaacgagctggtggtgcagtttcaggtgctcaaccagagctgt
ggtagtgcgtgctggagcccagtcgtcagtccctctaaagggggtgcgtgtgtggtgggg
gggtacagcgacgggaccctaaggatctttcacctggcctcctcagagatggagctcaag
ctgcacccgcaccctgtggccatcaccgccatccagtactccgctaacggtcaggtgatc
ctctctgcggggagggacggcctgatggctgtcagcaacccagtgaccggggttaccgtc
cgtatcatcagcgaccacaagggggcgcccatcactaccatccagtgtgtgaagaaacag
tacaaagaatttgggcttgaaggaaacgagatgtggttggctgccagtacagacagacgg
gtcagcgtttgggcagctgattggatgaaggacaagtgtgagctcctggattggctcaca
tttccagcccccgccaatcctgaggagtcagacagccttcctcccagcctggctgctttc
agccccatagaccctggcctggtggtgtacacaggctatggagtggagagagagctgtcc
ttctacagcctggccaagaaacgggtcataaagaagattgccctgtcccattgggccatg
tgcttcagcctctcctccaagggtcgcctcatagcagtgggctcaaaagagcgagtgctg
aagctcatcaaatcatccagcggtaggttccaggacttcctccaccacagtgactctttg
cagacctgtcgattctccccctcagggaaactcctcttcaccgtcgcctacaacgagatc
ctgctgtgggaggtgcatggcctgtag

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