Coregonus clupeaformis (lake whitefish): 121567502
Help
Entry
121567502 CDS
T08357
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121567502 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121567502 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121567502 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121567502 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121567502 (si:ch211-11n16.2)
Membrane trafficking [BR:
cclu04131
]
Autophagy
Other autophagy associated proteins
Others
121567502 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
121567502 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
121567502
NCBI-ProteinID:
XP_041733526
LinkDB
All DBs
Position
6:48572899..48594895
Genome browser
AA seq
679 aa
AA seq
DB search
MRCVVVIWSGGSFCYCQAKDGLITMSEVLMKEMEDVSLCHIKTEEHPENGRSFLLVDEQE
NLQVHDEAQFLERLGCGDMQGVKVLSIFGNTGDGKSHTLNHILFGGDIVFYTSKSPSSCT
VGVWAAFDPGLGLVALDTEGLLGAAANQNQRMRLLLKVLAVSDVVVYRTRAERLHNDMFQ
FLSSASGAYLKHFTPELRALSSRCGMDVPLSSLGPAVIVFQETTHTQLLGHERTDVPGYA
DTQLQRRFHDLGLGTEAFSSVQYVGTQTITPPTNYSLLLEAVRQQVRNTATRSPRQPAIV
FSALQALSDRFCGEILDDKIPLYSFFPDEYFTCSSVCLSCNIRCKNGMNHLRDRVPHLAD
GLCQYAHQYNNKVLICKRCYEGGREVIVIPKTSASTDNPWFGLAKFAWSGYVLECGSCGI
IYRSRQYWLGNQDPESGVVRPEVKHVWEGSEAFLTDHQNAAQRVLDGMNFVIQSVSEYST
GPTKAVTSWLTDQVAPPYWRPNTDITACHCCKKPFEEAERKHHCRSCGEGFCQACSTRRM
PVPERGWGSTPVRVCDACHRQGGTDTTNQVAVVEPRGLMARRVTEVAQSTLDMVTTAVDY
PLCFVKGVARPDYWIPDPQIVQCHQCSKAFTPSMSKHHCRACGQGVCSGCSSKSRPVPSR
GWDHPVRVCDGCASRKGRL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgtgttgttgttatctggagtgggggaagtttctgctactgtcaggccaaggat
ggtttaataacaatgtcagaagtactgatgaaagaaatggaggatgtatcgctttgtcac
ataaaaacagaagaacacccggaaaatggtcggagttttcttctggttgacgaacaagaa
aatctgcaggtccatgatgaggctcagttcctggagaggctgggctgcggggacatgcag
ggcgtcaaggtcctctccatctttggcaacacgggcgacggcaagtcccacaccctcaac
catatcctgtttggcggggatatcgtattctacacctccaagtcccccagctcctgcaca
gtgggcgtgtgggccgcctttgaccccgggctgggcctggtggctctggacacagagggc
ctgctgggggctgcggccaaccagaaccagcgcatgcgtctgctgctgaaggtgctggcc
gtatcggacgtggtggtgtaccgcacgcgggccgagaggctgcacaacgacatgttccag
ttcctaagcagcgcctcaggggcctacctgaagcacttcacccctgagctgcgcgccctc
tccagccgctgtggcatggacgtgcccctctcctccctggggccggcggtcatcgtgttc
caggagaccacccacacccagctactgggccatgagcgaacagatgtccctggctatgca
gacactcagctccagaggcgcttccatgacctgggcctgggtacagaggccttcagctca
gtgcagtacgtgggcacacagactatcactcctccgaccaactactctctgctcctggag
gctgtacgccagcaagtcaggaacactgccacacgatcgccccgccaaccggccatcgtc
ttcagcgctctgcaggcccttagtgacaggttctgtggggagatcttagatgacaaaatc
cccctctactccttcttccctgacgaatacttcacctgctcttcagtctgcctcagctgc
aatatccgctgtaagaacgggatgaaccatctaagagacagggtccctcacctggcagac
ggactgtgtcagtacgctcaccagtacaacaacaaggtcctcatctgcaagaggtgttat
gaggggggcagggaggttattgtcattcctaaaacctcagcctccacagacaacccctgg
tttgggctggcaaagttcgcctggtctgggtatgtcctggagtgtggcagctgtggcatc
atctaccgcagccggcagtactggctgggcaaccaggacccagagagcggcgtggtgcgg
cctgaggtcaaacacgtctgggaggggtctgaggccttcctgacagaccaccagaatgcg
gcccagagggtgctggatgggatgaactttgtgatccagtctgtgtcggagtacagcacg
ggccccaccaaggctgtcacctcctggctaactgaccaggtggccccaccctactggaga
cccaacacggacatcaccgcgtgtcactgctgtaagaagccctttgaggaggcggagagg
aagcaccactgtcgttcgtgtggtgagggcttctgccaggcctgctccacccgcaggatg
cccgtgcccgagaggggctggggcagcactcccgtccgggtctgtgacgcctgccaccgc
cagggagggactgacaccaccaaccaggtggctgtggtggagccgcgggggctgatggcc
cgcagggtgacagaggtggcccaatctactctagacatggtcaccactgcagtggactac
cctctgtgctttgtgaagggagtggcccggcctgactactggatccctgacccccagatc
gtgcagtgccaccagtgcagcaaagccttcacccccagtatgtccaagcaccactgccgg
gcgtgtggccagggtgtctgcagcggttgctcctccaagagccgccccgtgccctcccgt
ggctgggaccaccctgtccgcgtctgtgacggctgcgccagccgcaagggcagactgtga
DBGET
integrated database retrieval system
