Coregonus clupeaformis (lake whitefish): 121567516
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Entry
121567516 CDS
T08357
Name
(RefSeq) ras and Rab interactor 2
KO
K23687
Ras and Rab interactor 2/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121567516
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121567516
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Gene cluster
GFIT
Motif
Pfam:
VPS9
RIN1
Motif
Other DBs
NCBI-GeneID:
121567516
NCBI-ProteinID:
XP_041733557
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Position
6:48924822..48950788
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AA seq
773 aa
AA seq
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MMRGLEDQDKKDESHRGVSDTVRTENEVTDGVLRRPLTLLDRLRLCQDAWAPGNPWDRDG
AHAALWGRPAGSFLVLRDSASQPILLCVSTGGGSGHVRDNPIQHIGAVYQLSQSYLGFSD
LAQLVVFYSLSRDVLPVCLFIPPWLYSVSDQPQSSSLSQLGPKSWLCPTTDLQPDHMTQR
APSTAMCTIQLTAANGALCIINPLYLHEHGDDWLTHQPTSSQRVNRPSNYRHERRLSTTR
PWSGAGLLTKRAISLEQEPCSSSPDNPGSPVVQASPSPPTPTGGVVLRRPSRDASIESLH
RTGSQDRTNTSRPPSDPKPLFSPAPQSPHRVSWIEDNVWLSQPPPSSLLRPPSLELDSLS
ISSIEEEPESVTSPSHSPHPSYRLADKVKHRLSAVGLAIGGLGSPQKRLTKRVQELSKRR
GGVFAEAVLEFVEMTLGAGFTPGMTGVDLLQEVRTALTALRETLLDCPEIHIFIDSMADT
PNWELDAILELSLHKVALKPVSSHLYTCLQSCRDHDGSLRKLRENQRVLEGRGVEELEGT
PGAGVPDPVTLEKIQQRWSAMHQSYSPSRKVHIMLKVCKTIYHSMTANANPGVVYGADDF
LPCLTWVLLRSDVVTLQLDTDYMMELLDPTQLQGEGGYYLTSLYASLFYISSFRPRLATR
QLSTEAQKSLSQWHRRRTLHCNQSRRTTNRRTLRRPGHGEKGRENSCDAETETGTGSVTD
APPAPSSVVAKALHIISEVVVAAREEGGSRAEGQGSPAAQLQASPRKERQDSG
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggggattggaagatcaggataagaaggatgaatctcacagaggtgtgagtgac
acggtgaggacagagaatgaggttactgatggagttttgcggaggcccctgactctactg
gacaggttgcgactgtgtcaggacgcctgggcccctgggaacccctgggatagagacggg
gcccacgctgccctctggggccggcctgctgggagcttcctggtgttgagggactctgcc
tcccagcccatcctgctgtgtgtgtccactggaggagggagtggacatgtcagagacaac
cccatacaacacattggtgcagtttatcagctatctcagtcatatttaggcttctctgat
ctggctcagttagtggtcttctactctctgagcagggacgtgttgccagtgtgtctgttc
atccctccgtggctctatagtgtatcagatcagccacagtccagcagtctgtcccagctg
ggtcccaagtcctggctgtgtcccaccactgacctccagcctgatcacatgactcagagg
gctcctagtactgccatgtgcaccatacagctgacagcagccaatggtgctctgtgcatc
atcaacccactctatctccatgagcatggcgatgactggctgacgcatcaaccaaccagc
tcacagcgagttaatcggccatccaattataggcatgagagacgactgagtacaacgaga
ccttggtcaggggcgggccttcttactaagagagctatttcattggagcaggagccctgc
agctccagtcctgataatccagggtctcctgtagtccaggcttccccgtctccccccacc
ccaacaggaggggtggttctgaggaggcccagtagggatgcttccattgagtcactccac
agaacagggagccaggaccgcactaacacctccaggcccccgtcagaccccaagcccctg
ttcagccctgccccgcagtcccctcacagggtgtcctggattgaggacaatgtatggctc
tcccaaccaccaccctcctccctcctccgtcccccctccctggagctggactcgctgtca
atcagcagcattgaggaggagccggagtcggtcaccagcccctcccactccccccacccc
tcgtatcggttggccgacaaggtgaagcaccgcctctcggctgtgggcctggccattggt
gggctggggtctccacagaagaggctgaccaagcgggtgcaggagctcagtaagcggagg
ggcggggtatttgcagaggcagtgctggaattcgttgagatgaccctaggggctgggttt
acccctggaatgacaggtgtggatttgcttcaggaggtgcgtacggctctcactgccctg
agagagacactgctggactgtcccgagatacacatcttcatagacagtatggccgacaca
cccaactgggagctggatgccatactggagctctccctacacaaggtggccctgaagcct
gtgagctcccacctgtacacctgcctccagagctgtcgggaccatgacggtagcctgcgg
aagctgagggagaaccagcgggtcctggagggccggggggtggaggagctggaagggacg
cctggggcgggggtccctgaccctgtcaccctggagaagatccagcagaggtggtcagcc
atgcaccagtcctactcccccagcaggaaggtccatatcatgctcaaggtctgcaagacc
atctaccacagcatgacagccaatgccaacccaggtgtagtgtacggggctgatgacttc
ctgccctgtctgacctgggtgcttctgcgtagtgatgtggtcactctgcagctggacact
gactacatgatggagctactggaccccacacagctgcagggagagggaggttattacttg
acgtccctgtacgcctctctcttctacatcagcagcttccgccctcgtctcgccacgcgc
cagcttagcaccgaggcccagaaatccctgagccaatggcatcgcaggcgcactctgcac
tgcaaccaatcacgacgcaccacaaatcggaggaccctccggagacctgggcatggcgag
aagggcagggaaaactcctgtgatgcagagacggaaactggcacaggaagtgtaactgac
gccccaccggcgccctctagtgttgtggccaaggcactgcacataatctcagaggttgtg
gtagcggcgagggaggaggggggcagcagagcggagggccaaggatccccagctgcacaa
ctccaggcctcacctcggaaggagagacaggactcaggttag
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