Coregonus clupeaformis (lake whitefish): 121567519
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Entry
121567519 CDS
T08357
Name
(RefSeq) sodium/calcium exchanger 2-like
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121567519
04020 Calcium signaling pathway
121567519
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121567519
04261 Adrenergic signaling in cardiomyocytes
121567519
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121567519
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121567519
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
121567519
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Others
121567519
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
121567519
NCBI-ProteinID:
XP_041733560
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Position
6:complement(4589364..4610630)
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AA seq
931 aa
AA seq
DB search
MSYPSMSPEFWSNSSTGLGSSSKCSQPVVCKPGTLLPVWKPLGPGLGDQVARAVVYFTCL
MYMFLGVSIIADRFMASIEVITSQEKEVTITMPSGETSVATVRIWNETVSNLTLMALGSS
APEILLSVIEVCGHGFEAGELGPGTIVGSAAFNMFVIIAICVWVIPEGETRKIKHLRVFF
ITAFWSIFAYIWLFLILSVISPGVVEVWEALVTLLYFPVCVILAWIADRRLLFYKYMAKR
YRADKHGIVVETEGDTTPKGFEMIMDGKFPPRGGAVGMLPNENCQDGANNAAGAVAYLPN
SNSTMVTVENTKELDESRKEVIRILKQLKQKFPDKELDQLVELANYYALLHQQKSRAFYR
IQATRMMTGAGNVLKRHAADHTRRAAAVEEDVVCEDDDLAECSRLAFESTHSQCMENCGV
LRLAVVCQGGMGESTFYVDYRTEDGSANAGSDYEYSEGTLVFKPGETRKEIKVGIIDDDI
FEEDEHFFVRLLNLRIGDPEGMFESDEPGAGPKGRLVEPLVTMVTILDDDHAGIFTFRDR
LVRISESVGTVEFTVVRNSGARGTVILPYHTEAGTAKGGGVDYEDTQGELEFSNDQTTQT
LQVRIIDDEEYEKKENFFIVLEEPRWLKRGISALLLNQEDPDGQMSAEEEEARRIAEMGK
PVLGEHSRLEVVIEESYEFKSTVDKLIKKTNLALVIGTHSWREQFVEAVTVSAGDGDDDD
EEGREERLPSCYDYVMHFLTVFWKVLFAFVPPTEYWNGWACFFVSISVIGILTAIIGDLA
SHFGCTVGLRDTVTAVVFVALGTSIPDTFASKVAATQDQHADASVGNVTGSNAVNVFLGI
GVAWSVAAVYWKVQGKEFRVDPGSLAFSVTLFTSFAFICMGVLLFRRRPSIGGELGGPRT
ARIITSLFFLGLWFLYVLFSSLEAYCHIEGF
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatccctccatgtctccggagttctggagcaacagcagcacgggactgggcagc
agttcaaagtgctctcagccggtggtgtgcaagccgggcaccctgctgcccgtgtggaag
cccctgggccccgggctgggcgaccaggtggccagggccgtggtctacttcacctgcctt
atgtacatgttcctgggagtgtccatcatcgcagaccgcttcatggcctctatcgaggtt
atcacctcacaggagaaggaggtgaccatcaccatgccaagcggtgagacgtctgtggcc
actgtacgtatctggaacgagactgtgtccaacctgactctgatggctctaggctcctcc
gcaccagagatcctgctgtctgtcatagaggtgtgtgggcatgggtttgaggcgggtgag
ctgggccctggcaccatcgtgggcagcgctgccttcaacatgtttgtgatcatcgccatc
tgtgtgtgggtcatccctgaaggagagaccaggaagatcaaacacctgcgtgtgttcttc
atcacggccttctggagtatcttcgcttatatctggctcttcctcatcctctctgtcatc
tcacccggagtagtggaggtgtgggaggccctggtcaccctgctctacttcccagtgtgt
gtgatcctggcctggatcgccgaccgccgcctgctcttctacaagtacatggccaagcgt
taccgtgccgacaagcacggcatcgtcgtggagacggagggggacacaaccccgaaaggc
ttcgagatgattatggacggaaagttccctcctaggggaggggcggtgggaatgttgccc
aatgagaactgccaggatggtgccaacaatgcagcgggcgccgtggcctacctgcccaac
tccaacagcaccatggtgactgttgagaataccaaggagctggacgagagccgcaaggag
gtgatccgcatcctgaagcagctgaaacagaagtttccggacaaggagctggatcagctg
gtagaactagccaactactacgccctcctccatcagcagaagagccgcgccttctaccgc
atccaggctacacgcatgatgaccggcgccggcaacgtgctcaagaggcacgccgccgac
cacacccgccgtgccgccgccgtggaagaggacgtggtctgcgaggacgatgacctggcc
gagtgcagccgcctggcgttcgagagcacccacagccagtgcatggagaactgtggcgta
ctgaggctggctgtggtgtgtcaagggggcatgggggagagcaccttctatgtggactac
cggaccgaggacggctcggccaacgccgggtccgactacgagtacagcgagggaacgctg
gtgtttaaacccggagagacccgcaaggagatcaaggtcggcatcatcgatgatgacatc
ttcgaggaggacgagcactttttcgtgcggctgctcaacttgcgcatcggtgaccccgag
gggatgttcgagagtgatgagccaggtgcgggacccaagggccgcctggtggagccactg
gtcaccatggtgaccatcctggatgacgaccatgctggcatcttcacattccgtgatcgg
ctggtgcgcatcagtgagagcgttggcaccgtggagttcacagtggtgcggaactcgggc
gcccgcggcacggtgatcctgccctatcacacggaggcgggcacggcgaaggggggcggt
gtggactacgaggacacccagggagagctggagttctccaacgaccagacaactcagacc
ctgcaggtgaggatcattgacgatgaggagtatgagaaaaaggagaacttcttcatcgta
ctagaggaaccacgctggctgaagaggggaatctcagcccttctgctcaaccaagaggat
cctgatggccagatgagtgcagaggaggaggaggcgaggcgcattgcagagatgggaaag
cccgtcttgggggagcacagccggctggaggtggtcattgaggagtcttatgagttcaag
agcaccgttgacaagctcattaagaagaccaacttggcccttgtgattggcactcactcc
tggagagagcagtttgtggaagctgtgactgtcagcgcaggggatggtgatgacgatgac
gaggaggggcgtgaggagcgtctgccatcctgctacgactacgtcatgcacttcctgacg
gtgttctggaaggttctgtttgcctttgtgccgcccaccgagtactggaatggctgggcc
tgcttcttcgtgtccatctcggtcatcggtatcctgactgccatcatcggggacctggcc
tcccacttcggctgcaccgtgggcctcagggacactgtcactgccgtggtgtttgtggct
ctgggcacctccattcctgacacgtttgccagcaaggtggcggccacgcaggaccagcac
gccgacgcgtccgtgggcaacgtgacgggcagcaacgcggtcaacgtgttcctgggcatc
ggggtggcgtggtcggtggcagccgtctactggaaggtgcagggcaaggagttccgcgtg
gacccgggctccctggccttctccgtcaccctcttcaccagcttcgctttcatctgcatg
ggcgtgctgctgttccgccggcggccctctatcgggggggagctgggcgggccgcgaaca
gcacgcatcatcaccagcctcttcttcctgggcctctggttcctctacgtcctcttctcc
agcctggaggcctactgccacatagagggcttctag
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