KEGG   Coregonus clupeaformis (lake whitefish): 121567526
Entry
121567526         CDS       T08357                                 
Name
(RefSeq) WD repeat-containing protein 20
  KO
K24731  dystrophia myotonica WD repeat-containing protein
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cclu04990]
    121567526
Domain-containing proteins not elsewhere classified [BR:cclu04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   121567526
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I WD40_Prp19 WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_EML WDR55 PD40 NBCH_WD40
Other DBs
NCBI-GeneID: 121567526
NCBI-ProteinID: XP_041733578
LinkDB
Position
6:4813686..4819930
AA seq 689 aa
MPVSPIFIVVSSIISRSTFQFPVQLDCGLLKMAGDGGALKDINEIKSQFRTREGFYKLLT
LSDSQQRGGLPRGLSAGTTVGPGGGPGSIPGGGLGLVQGPGAASSSNAAANSSPAGFLPP
VRVSMVKLQPEDPSEESERVCFNIGRELYFYTYTNIKKAVDLSKPIDKRIYKGTQPTCHD
FNQYSARADSVALIVGFSAGQVQYLDPIKKETSKLFNEERMIDKSKVTCLKWLPKSENLF
LASYASGHLYLYNVEHPCGTAAPQYSLLRQGEGFAVYACKTKTPRNPLLRWAVGDGGLNE
FAFSPDGVHVACVGQDGCLRVFHFDSMELQGVMKSYFGGLLCVSWSPDGKYLATGGEDDL
VTVWSFAESRVVARGHGHKSWVNVVAFDPFTTSLEDEEPMELSGSEEDLQQGPLHFGRVR
TSSTLSRLSRHSSKGGSPSVTYRFGSVGQDTQFCLWDLTDDVLYPRLPLSRALTNTFGPT
IPPSVSSTINNTTGGGSGGVEGHQHPTTNPHQPPTMPLPLPRSLSRSNSLPHPAVANVSK
GQSTTESGGGSGGGNATPFSIGRFATLSLQERKSDKSGGSGVGGEKEHKRYHSLGNISKS
NDKINVAPRSSRLDAAKVLGTTLCPRMHEVPLLEPLVCKKIAHERLTVLVFMDDCIITAC
QEGLICTWARPGKVNLTAQNGNSPSGTVV
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgcccgtctctcccattttcattgtagtttcgagtattatttccaggtcaacatttcaa
tttcctgtgcagcttgattgtggactactaaaaatggctggtgatggaggcgctctgaag
gatatcaatgagattaaatcccagttcaggactagagagggtttttacaaactgctgacc
ctctcggattcacaacaacgaggcggactacctcggggtctgtccgcaggtaccacggtg
ggccccgggggtggaccgggttcgatacccggtggtggtttaggtctggtgcaggggccc
ggagctgcctcctcctccaatgccgcagccaactcctctccggcgggcttcctccctcct
gtcagggtctccatggtgaagcttcagcccgaggacccgagcgaagaatccgagagagtg
tgttttaacatcggaagagagctttatttctacacctacacaaatatcaagaaggctgtg
gacctcagtaaacccatagacaagcgtatctacaagggcacccagcccacctgccatgac
ttcaaccagtactctgccagagcagacagtgtggccctcattgtgggcttctcagcaggc
caggttcaatacctggaccccattaagaaggagacaagcaagctcttcaatgaggaaagg
atgatagacaagtccaaggtgacctgtctgaaatggctgcccaagtcagaaaacctgttc
ctggcctcctacgccagtggccacctctacctctacaacgtggagcacccgtgtggcacc
gccgccccgcagtactccctgctccgccagggcgagggctttgcagtctacgcctgcaag
acgaagacgccccgaaacccgctgctgcgctgggccgtgggcgacggaggcctcaacgag
tttgccttctcgccggacggcgtgcatgtggcgtgcgtgggccaggacggctgcctgcgc
gtcttccactttgactccatggagctgcagggcgtaatgaagagttactttggcggcctg
ctgtgcgtctcctggagccccgacggcaaatacctggccacgggtggcgaggacgacctg
gtgacggtgtggtcattcgcggaaagccgcgtggtggcccggggacacggccacaagtcc
tgggtgaacgtggtggcctttgaccccttcaccaccagcctggaggacgaggagcccatg
gagctgagcggcagcgaggaggacctacagcaggggccgctgcactttggccgcgtgcgc
accagcagcacgctgtcacgcctctcccgccacagctccaagggcggctcgccctccgtc
acctaccgcttcggctcggtgggccaggatacccagttctgcctgtgggacctgacggat
gacgtgctgtacccgcgtttgcccctgtcccgtgccctcaccaacaccttcggccccact
atccccccctctgtcagcagcaccatcaacaacactacaggtggagggagtggaggggta
gagggccaccagcaccccaccactaacccccaccagccccccaccatgcccctgcctctc
ccccgctccctgtcgcgctccaactccctcccccaccccgccgtggccaacgtctctaag
ggccagagcacgacggagagcgggggagggagcggagggggcaacgccacccccttcagt
atcggccgcttcgccacgctctccctgcaggagcgtaagtcggacaagtctggggggagc
ggggtgggcggggagaaggagcacaagcgctaccatagcctgggcaacatcagcaagagc
aacgacaagatcaacgtagcgccacgcagcagtcgcctggacgccgccaaggtgctgggc
accaccctgtgcccgcggatgcacgaggtgcccctgctggagcccctggtgtgtaagaag
atcgcccacgagaggctgaccgtgctggtgttcatggacgactgcatcatcaccgcgtgc
caggagggcctcatctgcacctgggcacggccgggtaaagtgaacttgacagcacagaac
gggaactctcccagtggcacggtggtatag

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