Coregonus clupeaformis (lake whitefish): 121567581
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Entry
121567581 CDS
T08357
Name
(RefSeq) tripartite motif-containing protein 65-like
KO
K12031
tripartite motif-containing protein 65
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121567581
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121567581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_10
Prok-RING_4
zf-RING_11
WipA_Phos
IFT57
WH_MCM2
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
121567581
NCBI-ProteinID:
XP_041733677
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All DBs
Position
1:10778621..10793545
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AA seq
514 aa
AA seq
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MEAHNLSCIICLDPFMVPVTIPCGHTFCRDCITAHWDIKSKSDIGPHCPICNEKFTTRPV
LNRNVSLSFLSEATANSASVSSRDTVPVMRGDMTRAMALIMCDRHKKPLVYYCRTDNMCV
CCECAISECRNHEQVLVERERENRELLLRRKSVKVGICMEETERSIAGLTENIAKAKVTL
QQTSHWVNAKFSMLLKVLAEKQASTGNFIEQEEASLSQAEVRLEELQERAQQLRESQGQI
AALSNLSDTQLIQESRLVEVPRMKDIPVDVTLNLQERLSGVTDVLSRISKLVSEDLEKAV
STAVRQDKQGSPQDKRPVLAVVPSPAVPLHPAGKKGLSEYHCTLTFDPRTANSHLLLSQE
NRRAEHLTSAPRRVPAHEARFDHTWQVLCFQGFKHGQHYWELEVSKPWAYLGVTYEGIPR
KEKGKSCMVGMNDLSWSLQLDEHQLSAWHNGRRETVAGHYHHSHIGMLLDYEAGTLTYYG
DGQTRLHSFYCAFTQELFPACWIGEGVSITLCSP
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccacaatttgtcctgtatcatttgcttggaccccttcatggtcccagtcacc
atcccatgcggtcacaccttctgtcgagactgcatcacggcgcactgggacatcaagtcc
aagtccgacatagggccgcattgccctatctgcaatgagaaattcaccaccaggcctgtc
ctgaatcgcaacgtgtccctgtcctttctgtccgaggccacagcgaacagtgccagtgtg
tccagtagagacactgtaccagttatgaggggcgacatgaccagagccatggccctgatt
atgtgtgaccgacacaagaaacccctggtgtattactgccggacagacaacatgtgcgtg
tgctgcgagtgtgccatctctgagtgtaggaaccacgagcaggtgctggtggagcgtgag
agggagaaccgagagttactgctgaggaggaagagtgtgaaggtgggaatatgtatggag
gagactgagaggagcatcgctgggctgacagaaaatattgccaaagccaaggtgaccctg
cagcagacctcccactgggtgaatgccaagttctccatgctgttgaaggtcctagcagag
aaacaggcgtctacggggaacttcattgagcaggaggaggcttctctctcccaggcagag
gtcaggctagaggagctgcaggagagggcccagcaactcagggaaagccagggccagatc
gcagcccttagcaacctgtccgacacccagctaatacaggagtctcggctggtggaggtc
cctcgtatgaaggacattccagtggatgtgacccttaacctgcaggagaggctcagtggg
gtgacagacgtcctgtcgcggatctcaaagctggtgtctgaggacctggagaaggctgtg
tctacagctgtgaggcaggacaagcaaggttctccccaggataagcgccccgtcctggct
gtggtccccagccctgctgttccattacacccagctgggaagaaaggcctcagtgaatac
cactgcaccctgacctttgaccctcgtacggccaacagtcacctgctactctcccaggag
aatcgacgggcagaacacctgacctctgcgccgcgccgtgtcccagcccacgaggctcgc
tttgaccacacctggcaggtgctctgcttccagggcttcaaacacggacagcattactgg
gagctagaggtgtctaagccatgggcctacctgggggtgacctacgagggcatccccagg
aaggaaaagggaaagagttgcatggtgggaatgaacgatctgtcctggagcctccagctg
gatgagcaccagctgagcgcctggcacaacgggcgccgggagacggtggctggccactac
caccactcccacatcggaatgctgctggactacgaggcgggaacgctgacgtactatgga
gacgggcagacgcggctgcattccttctactgtgccttcactcaggagctgttccccgcc
tgttggataggggagggcgtcagcattaccctctgctcgccatga
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