Coregonus clupeaformis (lake whitefish): 121567613
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Entry
121567613 CDS
T08357
Symbol
snx19b
Name
(RefSeq) sorting nexin-19
KO
K17930
sorting nexin-19
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121567613 (snx19b)
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
121567613 (snx19b)
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GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
121567613
NCBI-ProteinID:
XP_041733729
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Position
6:27473725..27512147
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AA seq
981 aa
AA seq
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MSHTQSETVGPIQWTMAELLGQRSLLGFGALLTWLILFHLLVNVWLLCVFTSLLVVMGGW
LGSQAVLDSNSVVHLERFITLERVPPSPESERQLDHEIQTTVRKIIRDFVSSWYCIVSSE
RDFEVEVQSAMYSMAMELKNRSRRVDRKVLTQRVLDLCGGHLQSYLRAKEVMAELEKQPD
GENSLWKAYSQVCTPHPAVKSSAMEVNYARAIVDLLLHVLVPPPHLETRTGRFVVGELIT
CNVLLPFITKLSDPDWLNLLIISVFTKSSMQAPKASEPPKPPSLPQLTVLEQDQPQQDIQ
VPCSLPLRILSETPNDTEVATPELAAYDIIDSAELYCPQNNIEEEEPRQARQYIGICPMD
YLRPVKSNPFYQETDSDLDSPLTDFKRSSMESLVLIGAEEALSDRFRECAKPTDISSVMD
LEDDLRVYPGLAEVTSSPKVVVSEQQDHPDAFANALCTMTEDVPSSVRSLQDLETRDSGT
SPERELLSVDLAVGCHSNGLMASVSGPLQTSSPMVPLPSFSFEPLSSPEGPIIIQNLRIP
GTITAKEHRGTGSHPYTLYTVKYETAMDSDNPGSIQPVAYHTVNRRYSEFLNLQTRLEEK
SDLRKLIKNVKGPKKIFPDLPFGNMDSDKVEARKGLLETFLKQLCAIPETANSEEMQEFL
ALNTDARIAFVKKPFIVAHIDKIVDTLKTAFPRSELQSPTEDMDGDTEGKPSSDKKNKSR
LRFSSKITPVLNVSDMRPKVLYCLDEGSTGFNGLSIAGLEAFIKEQELAVMCDAEAEREC
SPGLTGELGGCGCPQNKLPGASIQDSVAETALADVALDIMCLLMKDQWSWLCTDNIRKTI
RLLFGTLIDRWLDVSVANLTCTQYWVIYLRVLQDAVWPGGSLPALPRPERSHQQKEDTKQ
QSLHCLMKLLPDLLSDMLGSDKYQLSWQTALESLQDPYINRHLVYCIWDLLLEFLVPETS
EEDFQKTLLQSLSKNAEKLPP
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacactcagtccgagacggttggcccaattcagtggaccatggcggagctactg
ggtcagaggagcctactgggctttggagctcttctgacatggctgattctcttccattta
ctggtgaacgtatggctgctgtgtgtcttcaccagtctcctggtggtcatggggggctgg
ctgggatctcaggctgtcctggactccaacagcgttgttcacctagagaggttcatcaca
ttggaaagggtccctccttcgcctgagagtgaacggcagctagaccacgagatacagacc
accgtgcgcaagataatccgagactttgtgtcctcctggtactgcatagtgtcctcggag
cgggactttgaggtcgaggtgcaaagtgccatgtactccatggcgatggagctgaagaat
cggtcaagaagagtggataggaaggtcctgacccagagggttttggacctgtgtggcggc
caccttcagagctacctgagagccaaagaagtcatggccgagctggagaagcaaccggat
ggagagaacagcctctggaaagcatactcccaggtctgcacacctcaccctgctgtgaag
agctcagccatggaggtgaactacgccagggctattgttgacctgctgctgcatgtcctt
gtccctccgcctcacctggaaacccgaacgggaaggtttgtggtcggagagctcatcaca
tgcaatgtccttctccccttcattacgaaactatcggatccagactggctgaacctgtta
atcatttccgttttcaccaagtcaagtatgcaagcccccaaagcctcagaaccaccaaaa
ccaccatcactgccacagctcactgtcttagagcaggatcagccccagcaagacattcag
gtcccttgctctttacccttaaggatcctatcagaaacacctaacgacacagaggttgcc
acacctgagttggctgcttacgatatcatcgactcggcagagttgtactgccctcagaat
aatatagaggaagaagagcctagacaggctagacagtacattggtatctgcccaatggac
tacctgagaccagtcaaatccaacccgttctaccaagagaccgactcagatctggactcg
ccactgacagatttcaagaggagctccatggagtccctggttctgattggtgcggaggaa
gcgctgtcggaccgtttccgagagtgtgccaagcccactgacatcagcagcgtcatggat
ctggaggatgacctccgggtttaccctggcctagccgaggtcacttcctcccccaaagtt
gtggtctctgaacaacaggatcaccccgacgccttcgctaatgcgttgtgcaccatgacg
gaggacgttccctcgagtgtccgcagcctccaggacctggagacgagggacagcggcacc
agtccagagagagagctgctgagcgtggacctggcggttggctgccactccaacgggctg
atggcgtcggtgagcggccctctgcagacctcctcccccatggtgcccctgccctccttc
agcttcgagcccctcagcagccccgaaggcccgatcatcatccagaaccttcgcatcccc
gggaccatcacggccaaggagcaccgtggcaccggctcgcacccgtacactctctacacg
gtcaagtatgaaacagcaatggactctgataacccagggtctatccagccagttgcctat
cacacggtcaaccgccgatatagtgagtttctcaacctacagacccgcttggaggagaaa
tcagacttgcgaaaactcatcaaaaatgtgaaaggaccaaagaaaatatttccagacttg
ccgtttggtaacatggacagtgacaaagttgaggccaggaaagggctgctcgagactttt
ctcaagcaactttgtgctatacccgaaactgccaacagtgaagaaatgcaggagtttctt
gctcttaatacagatgcaagaattgcctttgtcaagaagccgttcatcgtagcacacata
gacaagattgtggataccttgaagacggcgtttcctcgctcagagctacagagccctaca
gaagacatggacggagatactgagggaaagccttcctcggataagaaaaacaagtcccgg
ctaaggttctccagtaaaatcaccccagtccttaatgtctctgacatgaggcctaaagtg
ctatactgcttggatgaggggagcacagggtttaacggcctgtcgatagctggcctagag
gccttcatcaaggagcaggaactagcggtgatgtgtgatgcagaggctgagagggaatgc
agtccaggcctcacaggagaacttggaggctgtgggtgcccacagaataaattaccaggt
gcatccattcaagattctgtggcagagacggccctggctgacgtggccctagacatcatg
tgtctgctgatgaaagaccagtggagctggctgtgcaccgacaacatccggaagactatc
cggctgctatttggaaccctcattgacaggtggcttgacgtgagcgttgctaacctgacc
tgtacccagtactgggtgatctacctgcgggtgctgcaggatgcggtgtggccggggggc
agcctaccagccctgccccgcccggagcgcagccaccaacagaaggaggacaccaagcag
cagtccctgcactgcctcatgaaactactgccagatctgctctcagatatgctgggctct
gacaaataccaactaagctggcagactgcactggaatctctgcaggacccttacataaac
agacacctggtctactgtatctgggaccttctcctcgagttcctcgtccccgaaacatct
gaggaggactttcagaaaaccctgctgcaaagtctgtccaaaaatgcagagaaactacca
ccatga
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