Coregonus clupeaformis (lake whitefish): 121567614
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Entry
121567614 CDS
T08357
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 15-like isoform X1
KO
K08629
a disintegrin and metalloproteinase with thrombospondin motifs 15 [EC:3.4.24.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121567614
Peptidases and inhibitors [BR:
cclu01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121567614
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Gene cluster
GFIT
Motif
Pfam:
ADAMTS_spacer1
TSP1_ADAMTS
ADAMTS_CR_2
Reprolysin
TSP_1
Reprolysin_5
ADAMTS_CR_3
Pep_M12B_propep
Reprolysin_3
TSP1_spondin
Reprolysin_2
TSP1_CCN
Reprolysin_4
Rep_fac-A_3
Motif
Other DBs
NCBI-GeneID:
121567614
NCBI-ProteinID:
XP_041733731
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Position
6:complement(27603152..27637304)
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AA seq
956 aa
AA seq
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MSMFIGSLFIFMDVLFYAKLNYCMEIDFCVPVRFDHKHLERHTIRQTEERRNDQLVVFKI
TAFSQEFYLNLLPDSTFISPNIPPHSGSLASNSSANTDLSHCFYSGDVNAEQESYAALSL
CKGLQGSFSYQGMEYFINQLGNERAGGVYTVNTERRTHVIRRRGPDRDSSGNSTTNRCGV
GPGLTQNISGSFEKYKHMKGLELDSLTETVLKSLGRSKRFASIPRFVEVLVVADESMAKF
HGDDLKHYLLTLMSVAARLYKHPSIMNSINIVVVGFLVINEAEKGPKISTNAALTLRSFC
SWQKHLNKYNDKHPEYWDTAILFTKQDLCGATTCDTLGMADVGTMCDPKRSCSVIEDDGL
PSSFTTAHELGHVFNMPHDNVNACKEVFGKLKDNHMMSPTLIQIDHANPWSVCSAAIITD
FLDRGHGDCLLDQPQKLLALPESLPGTNYSLHRQCELAFGTGSKPCPYMQHCSKLWCTGK
ARGQLVCQTRHFPWADGTSCGNSKLCFRGVCTDKNNTTKTKVDGGWGAWGVYGSCSRTCG
GGVHLANRDCNNPVPEYGGKYCQGLRVKHRSCNLDACPESGKSFREEQCEAFNGFSLNTN
RLSASVVWVPKYSGVSPKDKCKLICRANGTGYFYVLAPKVVDGTLCSPDTSAVCVQGKCI
KAGCDGKLSSNKKYDKCGVCGGDNQSCKKVSGLFTKPIHGYNFVVMLPVGASNIDIRQRG
YRGLVNDNNYLAVKNQHGKYLLNGNYVVSAVERDIIVKGSLLRYSGTTSAVEILQATRPL
QEALTVEVLSVGKMTPPRVRYSFYLAREHHKEVKILKKVERSHSQNSVLMDSNKVELKGP
SHKSMPPNMWSTGAWEECTVTCGNGLQSRLVQCTDPEGKTATDCDGLQRPGATRVCGDPC
PMWDIGQWSLCSKTCGRGFKRRPLRCTTQTGMHLPREHCSGMKKPQELDFCTVQSC
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtttattggctctctgtttatttttatggatgttctattttatgctaaattg
aactattgcatggaaatagatttttgcgtacctgttcgatttgatcataaacatttagaa
agacatactattcgacagacggaggagagaaggaatgaccaactagttgtttttaaaata
acggctttcagtcaagaattttatctcaaccttttaccggattctacatttatttcgccc
aacatccctcctcacagcggctccttagcatcaaattcctctgcaaacacagacctgagc
cactgcttctactctggtgatgtcaacgcagaacaggaatcgtatgctgcgctgagcctc
tgcaaaggcttacaaggctccttttcttaccagggcatggaatatttcatcaatcagctt
gggaacgagagggcaggaggagtatatacagtgaatactgagagaagaacccatgtcata
cgccgccggggaccggacagagactccagcggtaattccaccacgaataggtgtggagta
ggacctggtttgacccaaaacatttcagggtcttttgagaaatataaacacatgaaagga
ctggagctggacagcctgactgaaactgtattgaagagcctgggtagatccaaaaggttt
gcctccatccctaggtttgtggaggttctcgtcgtggctgatgagtctatggccaaattc
cacggggatgacttgaaacattacctgttgacactgatgtctgttgctgcgaggctgtac
aagcaccccagcatcatgaactccataaacatagtggtagtgggcttcttggtgattaac
gaagcagagaaaggacccaagatttccaccaatgctgccctcactctgcgcagtttctgt
tcttggcagaaacatttaaacaaatacaatgacaagcaccctgaatactgggacactgca
attctattcaccaaacaggacttgtgtggagccactacctgtgacaccttaggcatggca
gacgtgggcactatgtgtgatccgaagagaagctgctctgtcatcgaggatgatggtctc
ccttcgtccttcaccactgctcatgaactgggccatgtcttcaacatgccccatgacaat
gtgaacgcctgcaaggaggtgtttgggaagctcaaggacaaccacatgatgtcccccacg
ctaatccagatcgaccatgccaacccctggtctgtgtgcagtgcagccatcattacagac
ttcctggacagaggccacggggactgtcttctggatcagccccaaaagctgctggctctg
cctgagagcctcccaggcaccaactacagcctccaccgccagtgtgagttggccttcggt
acgggctccaagccctgtccctacatgcagcactgctccaagctgtggtgcacgggcaag
gccagaggccagctggtctgccagacacgtcatttcccctgggccgatggcaccagctgt
ggcaacagtaagctctgcttccgaggggtgtgcaccgacaagaacaacaccactaagacc
aaggtggatggtggatggggggcatggggtgtgtatgggtcgtgttccagaacctgtgga
ggaggagttcatctggccaatagagactgtaacaaccctgttccagaatatgggggaaaa
tactgccaaggactccgtgtgaagcatcgctcctgcaatttggacgcctgcccagaatca
ggcaaaagcttccgtgaggagcagtgcgaggcgttcaacggattcagcctcaacaccaac
aggctctcagcgtctgtggtgtgggtccccaaatactctggagtgtcacccaaggacaag
tgcaagctcatctgcagggccaacggaacaggctacttctatgtccttgctccaaaggtt
gttgatggaacactctgttctcccgacacctctgcagtgtgtgtccaagggaaatgtatc
aaggcgggctgcgacggcaagctcagctccaataagaagtatgacaagtgtggtgtgtgt
ggaggggacaaccaaagctgcaagaaagtgtccggattgttcaccaaacccatacatggc
tacaactttgtggtgatgttgcccgtgggagcgtccaacatcgacatccgacagcgtggc
tacaggggcttggttaacgacaacaactacctagcggtgaagaaccaacacggcaaatac
cttctgaacgggaactacgtggtgtcagcggtggagcgggacatcattgtgaagggcagc
ctgctgcgctacagcggcaccactagtgctgtggagatcctccaggccaccaggcctctc
caggaagccctgaccgtggaggtcctctcggtggggaagatgaccccgccccgggtccgc
tactccttctacctggcccgggagcaccacaaggaggtgaagatcctgaagaaagtggag
aggagccactcgcagaacagcgtcctgatggacagcaacaaggtggagctgaaggggccg
tcgcacaagtccatgcccccaaacatgtggtcgacgggggcctgggaagagtgcaccgtg
acctgtgggaacgggctccagagtagactggttcagtgtacggacccagagggcaaaaca
gccacggactgtgatggcttacagaggccgggtgccaccagggtatgtggggacccctgt
cccatgtgggacataggccagtggtctttgtgctctaagacatgtgggaggggcttcaaa
cggcggccgctgcgttgcaccactcagactggcatgcacctacccagagagcactgctct
ggcatgaagaagccacaggaactagatttctgcacagtgcagtcatgttag
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