Coregonus clupeaformis (lake whitefish): 121567615
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Entry
121567615 CDS
T08357
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 8-like
KO
K08623
a disintegrin and metalloproteinase with thrombospondin motifs 8 [EC:3.4.24.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121567615
Peptidases and inhibitors [BR:
cclu01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121567615
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Gene cluster
GFIT
Motif
Pfam:
ADAMTS_spacer1
ADAMTS_CR_2
TSP1_ADAMTS
Reprolysin
TSP_1
Reprolysin_5
Reprolysin_3
Pep_M12B_propep
TSP1_spondin
ADAMTS_CR_3
Reprolysin_2
Reprolysin_4
TSP1_CCN
Peptidase_M10
Motif
Other DBs
NCBI-GeneID:
121567615
NCBI-ProteinID:
XP_041733733
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All DBs
Position
6:27635157..27647351
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AA seq
955 aa
AA seq
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MFSKRFFVLLVLCVIDKSLSKLFASEEIVPVRINERSSSRFWKRSEELPRFRLSAFGRDF
TLNLSPDNSFLSTTLTIQRIKAKDLYTLRSASGAHGRHTSSDAETETDFHNLINKTQEME
RDLRSCFYSGTVDSNQDSVVAVSLCYGILGSFVTDGVEYLIEPKVLGSGRRERSTEQLHL
IKRRTPTEAPHDTQTVFDQLSEESREKADKESFKHEEKDPERQLRGKRFVSAPRFIETLV
VADASMTHFYGDEIKHYILTLVSVAAQLYKHPSIKNSVHMVVVKMVVVEDEEVGPSLSNN
GGVALRNFCAWQQQFNPASQRHPEHYDTALLFTREDICGHQSCDTLGVADVGTMCDPKRS
CSVIEDNGLQAAFTAAHELGHVLSMPHDDSKNCERMFGNLGGHHLMAPLFVHLNKTFPWS
PCSALYITEFFDNGHGDCLLDPPESILPLPGELPGTTYSLDRQCQQMFGEEFVHCPNTSD
SDICSQLWCREEGKPHCTTNNGSLHWADGTMCATNRSCLHGACMAAHEVMQPKVVVDGGW
GAWGPSQLCSRTCGGGVEFSYRECTDPVPQNGGKYCEGQRVQYQSCNTQACKNNDGKSFR
EEQCEKYNSFNYLDILGNMKQWIPKYAGVSPRDRCKLFCRAKGSSEFKVFEAKVVDGTTC
GPDTTSVCVQGQCVKAGCDQEIGSNKRLDKCGLCGGNGLSCRKITGSYNKVTYGYSDIVT
IPVGATNIDIKQRSHRNIKHDGNYLAIKRESGGYILNGNFSVSTVEQDIPVLGAVLKYSG
SSTTLERIQSFRQLREAVTIQLLATAGEAFPPKVKYTFFIPKDVYFTKSKERKASLHMIQ
AFGVPQWHLGEWSECSKSCSSGWSRRNVECRDNAGFHSNTCDKDLKPTDIRPCADLPCPI
WQMGPWSSCSRTCGQGERRRSVVCIDYTGKTVESEKCDANKQPAPVSGECVYQEC
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaagcggtttttcgttttactagtcctgtgcgtaatcgacaaatcactttct
aaattgtttgcatccgaggaaattgtacctgtcaggataaatgaaagaagcagcagtcgt
ttttggaaacgaagtgaagaactgccgaggtttagactcagtgcctttggccgagatttc
actttgaatttaagcccagataacagtttcttatctactacactgacaattcaacgcatc
aaagcaaaagatctctacactttacgcagcgcctcaggtgcccatggcagacacacttca
tctgatgctgaaactgaaacggactttcacaacttgataaacaagacacaggagatggaa
agagatttgagaagctgtttttactctgggactgtggactccaaccaagattctgttgtt
gcggtcagtctctgttatggcatccttggatcgtttgttacagacggggttgagtattta
attgagcccaaagtgctcggctcagggagaagggagaggtccactgaacagttacatttg
atcaaaagaagaacacccacagaagcaccacatgacactcaaactgtctttgatcaactg
agtgaggagagtcgtgaaaaagctgacaaggaaagttttaagcatgaggaaaaagatcct
gagagacaattacgagggaaacgctttgtatcagcaccacgatttattgagacgctggtg
gttgcagacgcgtccatgacacatttctatggagacgagataaagcactatatccttacc
ttggtctctgtggctgcccagctttacaaacatcccagtatcaagaactctgtccacatg
gtggtggtgaagatggtggtggtggaagacgaggaggttggaccgtcactctccaataac
gggggagtcgctctgcggaatttctgtgcctggcaacaacagttcaacccggccagccag
aggcatcctgagcactacgacactgctctacttttcacccgagaggatatctgtggacat
cagagttgtgacaccctaggggttgctgatgtgggaaccatgtgcgatccaaaaaggagt
tgctctgtcattgaggataatggacttcaagcagctttcactgctgcccatgaacttggc
catgtgctgagtatgccacacgacgactccaagaattgcgagaggatgtttgggaatctg
ggcggccatcacctgatggcccctctgttcgttcacctcaacaagactttcccctggtca
ccttgcagcgctctctacatcacagagttctttgacaacggacacggcgactgccttttg
gatccaccggagagcatcttaccgttacccggtgaactcccaggcaccacatacagtctc
gaccgccagtgccagcagatgtttggggaggagtttgtgcactgccccaacacttctgac
agtgacatctgcagccagctgtggtgcagggaggagggcaagccccactgcaccaccaat
aacggcagccttcactgggcagatggcaccatgtgcgccaccaacaggagctgtctgcac
ggtgcatgcatggcagcccacgaggtcatgcagccaaaggtggttgtggatggcggctgg
ggcgcgtggggaccatcgcaactgtgctccaggacatgtggagggggtgtggagttctcc
tacagggagtgcacagatcccgtgccccagaatggcggcaagtactgcgagggccagaga
gtccagtaccagtcctgcaacacccaggcgtgtaagaataatgatgggaagagttttaga
gaggagcagtgtgagaagtacaacagcttcaactatcttgacattcttgggaacatgaag
caatggattccaaagtacgctggtgtgtcgccccgggacaggtgtaaactcttctgcagg
gccaaaggcagcagtgaattcaaagtctttgaagccaaggttgtcgacggcaccacatgt
ggtcccgacactacgtctgtctgtgtacaaggccaatgtgtcaaggcgggctgtgaccaa
gagatcggttcaaacaagaggcttgacaagtgtggcttgtgtggtgggaatggcctcagt
tgcaggaagatcactggttcatacaacaaagtcacttacggatatagcgacattgtgacc
atacctgttggggctaccaatattgacatcaaacagcgaagccatagaaacatcaaacat
gatggaaactacctggcgatcaagcgagagagcggtggctacatactgaatggtaacttc
tctgtatccactgtggaacaggatatccctgttctcggggctgtgctgaagtacagtggc
tcatccaccaccttggagagaatccagagcttcagacaactgagggaggccgtcaccatc
cagttgctggccactgctggggaggcatttccacccaaggtcaaatacacattctttatc
cccaaagatgtgtatttcactaaatccaaagagagaaaggcttcattgcatatgatccag
gctttcggtgtgccccagtggcatttgggcgaatggtcagagtgctccaagagctgcagc
tccgggtggtcccgaaggaacgttgaatgcagagacaacgctggtttccattccaatacc
tgcgataaggacctgaaacccacagatatcagaccctgtgctgatctgccgtgccccatc
tggcaaatggggccttggtcatcctgttcacgaacttgtggccagggggaacgcagacgc
agtgttgtctgtatagactacaccggcaagactgtagagtcggagaagtgtgacgctaac
aagcaacctgcgccagtgtcgggagagtgtgtttaccaagagtgctag
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